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13_1_40cm_4_scaffold_3139_1

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: comp(3..545)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component id=3247809 bin=GWF2_Methylomirabilis_70_14 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 62.3
  • Coverage: 175.0
  • Bit_score: 229
  • Evalue 2.30e-57
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 161.0
  • Bit_score: 228
  • Evalue 5.60e-57
inner membrane ABC transporter permease YcjP similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 167.0
  • Bit_score: 188
  • Evalue 1.70e-45

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 543
GTGGCGGGCGCTCGGGACCGCGAGGTGACGATCCGGTCGGCGACGTTCACGTACGCGAACCTCGTGCCGTTCCTCGCCTTCGCGCTGTTCCCGTTTTACTTCATGCTCATCACCTCGCTGAAGTCGAACGCCGAGCTCTATAACCTCAAGTCCATCCCGTTCCTCGTCCAGACGGGAGTGATAGCCGACCACTACCAGTACCTGTTCCAGCGCACCGAGTTCCTCACGTGGATGAAGAACAGCCTCATCATCAGTGTCGTCGCGACGTCGGCGTCGCTCGCGATCGCGATCCTGGCCGGCTACAGCCTGGCGCGCCTGCGCTACCGCGGCGTGGCCTCGTTCGGCACCGCGGTGTTCGTCACCTACCTCGTCCCACCGACGCTCCTGTTCCTGCCACTCTCTCAGGTGGTCGTGTGGCTCGGGATCTCGGATACGATCTGGGCGCTCATCGTCACATACCCGACCTTCCTCGTGCCCTTCTGCACGTGGCTCCTGATGGGCTACTTTCGCACGGTGCCGCGGGAGGTCGAGGAGTGCGCCCTC
PROTEIN sequence
Length: 181
VAGARDREVTIRSATFTYANLVPFLAFALFPFYFMLITSLKSNAELYNLKSIPFLVQTGVIADHYQYLFQRTEFLTWMKNSLIISVVATSASLAIAILAGYSLARLRYRGVASFGTAVFVTYLVPPTLLFLPLSQVVVWLGISDTIWALIVTYPTFLVPFCTWLLMGYFRTVPREVEECAL