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13_1_40cm_4_scaffold_42082_3

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: comp(3744..4274)

Top 3 Functional Annotations

Value Algorithm Source
rpfC; two-component system sensor-response regulator hybrid protein RpfC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.6
  • Coverage: 173.0
  • Bit_score: 226
  • Evalue 2.70e-56
Sigma-54 factor interaction domain-containing protein id=2883274 bin=GWA2_Methylomirabilis_73_35 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 172.0
  • Bit_score: 140
  • Evalue 1.80e-30

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGAGCGGAATCGACTTCCTCCAGCTCCGCCCCGTGCGGGAGCTCGGCGTGCCGATCGTCGCCGTCTCGGGCGTCGCGACCGAGAGCCAGGCGCGCGAGTGCCTGCGCCTGGGCGCGACCGATTTCATGGGCAAGCCCATCCCGCTCGACCGCCTCGGCGAGGTCCTCTCCGTCATCGAGCCGCACGCGCTGAGCCGCCTCGAGGAGTCCTGGCGGCACGACGACCGACGCGCCTCGTCGCGGGCACACCTCTCCCTGCCGATCCACGTCCTCGAGTACGGCGGCGCCGAGCACCGCGGCACGACCGTGGAGCTCGGGGTGGAAGGCCTGAAGGCGCGTCTGGACGCGTCGCTCACGCCGCGCAGCGTGGTGAGGCTCTCGTTCACGCCGCCCGACGCGGGCTCCGCGATCACCGTCATGTCGCGGGTGATCCGCGCGGATCCCGATGGGCACGCGTTCGCCTTCGTCCACCTGCCCGAGGCCGACACCGAGCGCCTCCGCGACCTGATCCGGCGCCGCCCGTCCCGCTGA
PROTEIN sequence
Length: 177
MSGIDFLQLRPVRELGVPIVAVSGVATESQARECLRLGATDFMGKPIPLDRLGEVLSVIEPHALSRLEESWRHDDRRASSRAHLSLPIHVLEYGGAEHRGTTVELGVEGLKARLDASLTPRSVVRLSFTPPDAGSAITVMSRVIRADPDGHAFAFVHLPEADTERLRDLIRRRPSR*