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13_1_40cm_4_scaffold_4928_9

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: 8077..9288

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 422.0
  • Bit_score: 577
  • Evalue 1.90e-161
Efflux transporter, RND family, MFP subunit id=4900365 bin=GWA2_Methylomirabilis_73_35 species=Nostoc punctiforme genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 422.0
  • Bit_score: 572
  • Evalue 3.30e-160
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 384.0
  • Bit_score: 375
  • Evalue 1.70e-101

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1212
GTGACGACCGGCCGCGTCCTCTCCGCCGCCTCCGCCTGGGCGCTCGCCGCGGCGCTCCTCCTCACCGGCTGCTCGGACAGCGCCGCCGGCAAGCCCGCGCGCAACGCCGCCCCGCCGGCCGTGCCCGTGACCGCCGCCGACGCGGTGGAGAAGACCGTGCCCATCCAGCTCACCGCCGTCGGCAACGCGATGGCCTACACGACCGTCGGCATCAAGTCACAGGTCAACGGGCAGATCGTCCAGGTGCACTTCAAAGAAGGCCAGGACGTTCGCCAGAACGACCTCCTCTTCACCATCGACCCGCGCCCGTTCGAGGCCGCGCTCCGCCAGGCGGAGGCGGCGCTGCGCCAGCGCCAGGCCGAGGTTCAGCAGGCGATCGCGAACGTCGAGCGCGACACGGCCCAGCTCGCGAACGCGCGAGTCCAGGAGCGCCGCTACAAGGCGCTGGTCGAGAAAGAGCTCGTCGCACGTGAGCAGTACGATCAGCTCCAGACGAACCTGGCGGCGATGGAGGCGACCGTGCAGGCCGACCGCGCGGCGGTCGAGAACGCGAAGGCCTCGGAGCGGGCGGCGCAGGCCAACGTGGACAACGCCAGGCTCCAGCTCGGGTACACGGAGATCCGCGCGCCGATCGACGGGCGCACCGGGAACCTCCTGGTCCAGAACGGGAACGTCATCAAGGCCAACGACGACAACCCGCTCGTCGTGATCAACCAGGTCCACCCGATCTACGTCTCGTTCTCGGTTCCCGAGCAGTACCTGGCCGACATCAAGAAGTACCGCGCCCGGGGGCCGCTCCGGGTGGAGGCGCGGCTGCCGCGCCAGCTCGAGACGATCGCGACCGGCGAGCTCACGTTCGTGAACAATGCGGTGGACCAGACCACGGCCACGATCCAGCTCAAGGCGACGTTCTCGAACACGGACAACGCGCTCTGGCCCGGCCAGTTCCTCGACGTGGTGCTGACGTTCACGAGCCGCACCGCGATCGTCGTGCCGTCGCAGGCGATCCAGCCCGGCCAGCAGGGCCCGTTCGTCTTCGTCGTGAAGCCCGACGCGACGGTGGAGTCGCGTCCGGTCGCCCCTGGCACGCGCCTCGGCGCCGAGACCATCATCGAGCAGGGCCTGCGCGCGGGTGAGCGCGTCGTCACCGACGGCCAGCTCCGGCTGGTGCCGGGCGCGAAGGTCGAGATCAGGCCGCCCAAGACCTCATGA
PROTEIN sequence
Length: 404
VTTGRVLSAASAWALAAALLLTGCSDSAAGKPARNAAPPAVPVTAADAVEKTVPIQLTAVGNAMAYTTVGIKSQVNGQIVQVHFKEGQDVRQNDLLFTIDPRPFEAALRQAEAALRQRQAEVQQAIANVERDTAQLANARVQERRYKALVEKELVAREQYDQLQTNLAAMEATVQADRAAVENAKASERAAQANVDNARLQLGYTEIRAPIDGRTGNLLVQNGNVIKANDDNPLVVINQVHPIYVSFSVPEQYLADIKKYRARGPLRVEARLPRQLETIATGELTFVNNAVDQTTATIQLKATFSNTDNALWPGQFLDVVLTFTSRTAIVVPSQAIQPGQQGPFVFVVKPDATVESRPVAPGTRLGAETIIEQGLRAGERVVTDGQLRLVPGAKVEIRPPKTS*