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13_1_40cm_4_scaffold_6021_2

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: 222..1418

Top 3 Functional Annotations

Value Algorithm Source
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 80.2
  • Coverage: 399.0
  • Bit_score: 636
  • Evalue 2.60e-179
Extracellular ligand-binding receptor id=4973968 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 401.0
  • Bit_score: 624
  • Evalue 7.20e-176
putative branched-chain amino acid ABC transporter substrate binding protein similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 376.0
  • Bit_score: 439
  • Evalue 1.20e-120

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGATCCGCAACCCCGTCCGTCTCACGCTCACGCTCTTGGCCGCGTTGACCCTGGTGGCACTGCCGGGCGCGTCGAACCTGGCCGCCCAGGGTAGCAAAGGCACGATCAAGATCGCCACCCAGAGCCCGCTCAGCGGCGGCCAGGCAGCTCTCGGGGAGGGCATCAAGCTCGGCGCCCAGCTCGCCATCGAGAAGTTCAGGGGCAACCTCACGAAGATGGGCTACAAGGTCGATCTGGTGCCGTTCGACGATCAGGCCAAGCCGGACGTCGGCGTGGCGAATGCGAAGAACATCATCGCGGACAAGGACATTCTCGCCGTCATCGGCCATCTCAACTCGGGAGTCGCCATCCCCTCGTCCGAGGTCTACAAAGAAGTCAGCGTCGCGATGATCTCGCCCGCCAACACCAACCCGGTGGTCACCGACCGCGGCTACCCGAACGTCAACCGGGTGTGCGGCCGAGACGACGTCCAGGGCGTGGTCGGCTCCGAATTCGCCAACGGGACGATGAAGGCCAAGTCGGTGTACATCATCCATGACAAGACGCAGTACGGCCAGGGCGTGGCCGAGTTCTTCAAAGCCGATGCGGAGAAAAAGGGCATCAAGGTCCTCGGCTTCGAGGGCACAGAGGAGAAGTCGAACTTCGACCCCATCATCACCCCGATCAAGGCGAAGAATCCGAACGTCATCTACTTCGGCGGCATCTACGACCAGGCGGCGCCGTTCTTCAAGCAGACCCGGGAGAAGGGCGTGAAGTCGAAGTTCCTGGGTCCCGACGGCATGGACTCCTCCGACCTGACGAAGATCGCCGGCAAGGCCGTGGTGGGGATGTACTACACCTCGGCCGCCGGCCCGGCCTCGGCCCTGCCCAAGGCCAAGGCCTTCGTCGAGGACTTCAAGAAGAAGTTCGGCAAGAACCCCGAGCCGTACGCCGCCGAGGCCTACGATGCGACCGCCATCGCGCTCAAGGCCATCGAAGCCGCGGCCAAGAGCGGCAAGCTGAGTCGCGAGGACGTGGCGACGGCGGTCCGGAAGACGAAGCACAGCGGCATCACCGGCGAGATCGAGTTCGACACGAAGGGTGACCGGAAGAAGGCGCTCTACTTCGTGCTGCAGGTCGCCAGCGACGACCCGGCGAAGTGGGGCGACAACAAGATCGTCAAGCAGCTGACCATCGCCCCGCCCGAAAAGAAGTAG
PROTEIN sequence
Length: 399
MIRNPVRLTLTLLAALTLVALPGASNLAAQGSKGTIKIATQSPLSGGQAALGEGIKLGAQLAIEKFRGNLTKMGYKVDLVPFDDQAKPDVGVANAKNIIADKDILAVIGHLNSGVAIPSSEVYKEVSVAMISPANTNPVVTDRGYPNVNRVCGRDDVQGVVGSEFANGTMKAKSVYIIHDKTQYGQGVAEFFKADAEKKGIKVLGFEGTEEKSNFDPIITPIKAKNPNVIYFGGIYDQAAPFFKQTREKGVKSKFLGPDGMDSSDLTKIAGKAVVGMYYTSAAGPASALPKAKAFVEDFKKKFGKNPEPYAAEAYDATAIALKAIEAAAKSGKLSREDVATAVRKTKHSGITGEIEFDTKGDRKKALYFVLQVASDDPAKWGDNKIVKQLTIAPPEKK*