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13_1_40cm_4_scaffold_7852_9

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: comp(5768..6955)

Top 3 Functional Annotations

Value Algorithm Source
extracellular ligand-binding receptor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 77.0
  • Coverage: 395.0
  • Bit_score: 624
  • Evalue 1.00e-175
ABC-type branched-chain amino acid transport system, periplasmic component id=4288064 bin=GWF2_Methylomirabilis_70_14 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 398.0
  • Bit_score: 615
  • Evalue 4.30e-173
extracellular ligand-binding receptor similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 377.0
  • Bit_score: 275
  • Evalue 3.00e-71

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGACCACGAAAGCTCTCGGCGCGCTCATCACCGCGATGGGCGTCGTCGCCGGCGGCCTTCCCGCCGAGGCGCAGGGGCCGATCCGCATCGGCGCCTCGCTCTCGCTCACCGGCACGTACGCGAAGCTCGGCAGGAACCAGCACGAAGGCTACAAGCTTTGCGTGAAGGACCTCAACACCAAGGGCGGTCTGCTCGGACGCAAGGTCGAGCTTGTCGTGTACGACGACCAGTCCACCCCGGCGACCGCCGTCCGGCTCTACGAGAAGCTCATCACCGAGGACAGGGTCGACGGCGTGATGGGCCCGTACTCGTCACCGGTGACCGAGGCGTCCGTCAACGTCACCGAGAAGTACAAGAAGGTGATGGTCGCACCCCTCGCCGCCACGACCTCCATCTTCAAGCGCCCGCCGGACAAGAAGCGCTCCTACGTCTTCATGGTCATCTCGCCGGCCGAGGAGTACCTGGAAGGGCTCATCGACACGGCGGCCAAGCGAGGCCTCAAGACCGTGGCCATCGTGAACGAGGACACCCTCTTCTCGAAGGCGGCGGCGTCCGGCGCCGTCGAGCTCGCGAAGAAGAGGGGGATGCAGGTCGTGTTTCAGGAGGCCTACCCCAAGGGCAACACCGACTTCTCGGCGCTGCTCACCAAGGTCAAGGCGCTCACCCCCGACGTCCTCGCCGCCGCCACCTACTTCGACGACGCGGTGGCCCTCACGCGCCAGATGCGCGAGCTGGACGTAAATCCCAAGGCGTACGGGGTGACGGTGGGCGGCGACCTCCCGGAGTTCTACGACACGCTCAAGACTAACGCCGAGTACGTTTACGGGGCCACGCAGTGGGAGCCCGTCCTGCCCTATCCGAACAACACCGAGTTCTTCGAGGCGTACAAGAAAGAGTTCGGCCACGAGCCGTCGTATCACTCGGCGGCGGGGTACGCCGGTTGCCTCATCTACGCCGAGGCCGTCAAGCGGGCGGGCACGCTCGACGCCGACCGTGTGCGCGAACAGCTGCTCAAGCTCGAGATGCGCACGATCTTCGGCGAGTACAAGGTGGATGCGGACGGCTTCCAGGTGGCGCACAAGATCGTGACCTTCCAGTGGCAAGAGGGGAGGAAGGTCGTCGTCTGGCCGGACGAGCTGGCGTTGGCGAAGCCGCGGTTCCCGACCCCACCCTGGAATCAGCGCTGA
PROTEIN sequence
Length: 396
MTTKALGALITAMGVVAGGLPAEAQGPIRIGASLSLTGTYAKLGRNQHEGYKLCVKDLNTKGGLLGRKVELVVYDDQSTPATAVRLYEKLITEDRVDGVMGPYSSPVTEASVNVTEKYKKVMVAPLAATTSIFKRPPDKKRSYVFMVISPAEEYLEGLIDTAAKRGLKTVAIVNEDTLFSKAAASGAVELAKKRGMQVVFQEAYPKGNTDFSALLTKVKALTPDVLAAATYFDDAVALTRQMRELDVNPKAYGVTVGGDLPEFYDTLKTNAEYVYGATQWEPVLPYPNNTEFFEAYKKEFGHEPSYHSAAGYAGCLIYAEAVKRAGTLDADRVREQLLKLEMRTIFGEYKVDADGFQVAHKIVTFQWQEGRKVVVWPDELALAKPRFPTPPWNQR*