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13_1_40cm_4_scaffold_9503_6

Organism: 13_1_40CM_4_Rokubacteria_69_39

partial RP 41 / 55 MC: 1 BSCG 40 / 51 ASCG 11 / 38
Location: 4478..5182

Top 3 Functional Annotations

Value Algorithm Source
livF; high-affinity branched-chain amino acid ABC transporter (ATP-binding protein) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 234.0
  • Bit_score: 332
  • Evalue 6.10e-88
ABC transporter related id=3635567 bin=GWC2_Methylomirabilis_70_16 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 233.0
  • Bit_score: 275
  • Evalue 4.80e-71
high-affinity branched-chain amino acid transport ATP-binding proteinlivF (LIV-I protein F) similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 233.0
  • Bit_score: 266
  • Evalue 8.20e-69

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 705
TTGCTCAGGCTTGACGCGATCGACGCCTTCTACGGTGATTTGCAGGCGCTCGCGGCCGTTTCGCTCGAGGTGGGCCCGGGCGAGATCGTCGCGCTCGTCGGCGCCAACGCCGCGGGCAAGTCCACGACCCTCCGCGTCGTCTCCGGCCTGGTGGCACCGCGGCGAGGGCGCGTCCTCTTCGGTGACGAGGATCTGACGGGGGTCGCCGCGCATCGGAGGGTCGAGCGGGGGATCGTCCAGGTGCCGGAGGGACGTCGTCTGTTCCCCTTCATGAGCGTCGTCGAGAACCTGCTCCTCGGGGCACACACGGCGCGCGCCCGGGCCGAGCGCGCGACGACGCTCGAGTACGTCTACTCGCTCTTCCCCGCCCTCGCCGACCGGCGGACGCAGCTCGCGGGCTCGCTCTCGGGCGGCGAGCAGCAGATGTGCGCGATCGGCCGGGCGCTCATGGCGCGCCCGCGCGTGCTCATGCTGGACGAGCCGACGCTCGGCCTGGCGCCCGTGCTCGTCGCGAGGATCTTCGAGACGGTGCGGGCCATCAACGCGGACGGCGTCACGGTGCTGCTGGTGGAGCAGAACGTCCGCCAGGCGCTCACGCTCGCCCACCGGGCGTGCGTGCTCGAGAGCGGGAAGCTCGTGCTGGAGGGGCGGGCGCGCGAGCTGCTCGGCGACGAGCGGCTGAAGCGCGCGTATCTCGGACTCTAG
PROTEIN sequence
Length: 235
LLRLDAIDAFYGDLQALAAVSLEVGPGEIVALVGANAAGKSTTLRVVSGLVAPRRGRVLFGDEDLTGVAAHRRVERGIVQVPEGRRLFPFMSVVENLLLGAHTARARAERATTLEYVYSLFPALADRRTQLAGSLSGGEQQMCAIGRALMARPRVLMLDEPTLGLAPVLVARIFETVRAINADGVTVLLVEQNVRQALTLAHRACVLESGKLVLEGRARELLGDERLKRAYLGL*