ggKbase home page

13_1_40cm_4_scaffold_1041_21

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(19710..20720)

Top 3 Functional Annotations

Value Algorithm Source
rpoA; DNA-directed RNA polymerase alpha subunit (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 347.0
  • Bit_score: 503
  • Evalue 1.70e-139
DNA-directed RNA polymerase subunit alpha n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4J0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 356.0
  • Bit_score: 399
  • Evalue 2.40e-108
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 357.0
  • Bit_score: 415
  • Evalue 1.20e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1011
ATGACGACTCTCGATCTGACTGGGTTGGTCCGTCCGCACCTGGTCCTCCAGCCGCTCGAGCGGGGCTACGGCTACACCCTCGGCAACTCGCTGCGGCGCATGCTGCTCTCGTCGCTGCGCGGCGCGGCCGTGTGGGCCTTCCGTCTGGACGGCGTGGTCCACGAACACCAGACCATCCCCGCGGTCGTCGAGGACGTGCACCAGATCATCCAGCGGCTGAAACAGCTGACGCTGGTGCTTGCCCCGGAGGTGGACGAAGCGGTGCTGCACATCAAGCGCGACCGCGCGGGGCCGGTCTATGCGCGCGACATCGAGGAGCACGGCTCGGTGACGATCGTGAATCCCGACCAGCTGCTGTTCACGCTGCAGGACGACCGGGAGATCGTGGGAGAGCTGTACGTCAACAAGGGCCGTGGGTACGTCGAGGCCGAGCAGCACCCCGTCGACCGGACGCTCCCGGTGGATGTGGTGCGGATCGACTCGATCTACAATCCGGTCCGCCGCGCCAACTTCACCGTGGCCGAGACCCGGGTGGGCCAGCGCACCGACTACGACCGCCTCACGCTCACCGTCGAGACCAACGGGACGATCTCCCCGGAGGACGCCGTGGCCTATGCCGCGGCGCTTGCCCAGGAGCACTTCCGCTTCTTCGTCGACTTCGGCAAGGTGCCCATGGTGGCGGCCGAGCCGGCGGGCAATGGCGGCGCGGCGACCGGGCATCTGCGCGAGCTGCTGGCGCGCACCATCGACGACGTCGGGCTCTCGGTCCGCTCGGTCAACTCGCTCAAGAACTCGAACATCCGCACCCTCGGCGACCTGGTGCAGTACAGCGAGCACGACCTGCTCAAGGTGAAGAACGTCGGCGAGAAGGCCCTCGGCGAAATCGCCGAGTTGCTGCGGCGCGAGGGGCTGAACTTCGGGATGCGGGTCGAGGACTTGAACGGCGAGCTCAAGATCACGAACGAGGGCACGCCGCCCGTGGCGCAGCCGAGCGAGGGCGGGGAGGAGTAA
PROTEIN sequence
Length: 337
MTTLDLTGLVRPHLVLQPLERGYGYTLGNSLRRMLLSSLRGAAVWAFRLDGVVHEHQTIPAVVEDVHQIIQRLKQLTLVLAPEVDEAVLHIKRDRAGPVYARDIEEHGSVTIVNPDQLLFTLQDDREIVGELYVNKGRGYVEAEQHPVDRTLPVDVVRIDSIYNPVRRANFTVAETRVGQRTDYDRLTLTVETNGTISPEDAVAYAAALAQEHFRFFVDFGKVPMVAAEPAGNGGAATGHLRELLARTIDDVGLSVRSVNSLKNSNIRTLGDLVQYSEHDLLKVKNVGEKALGEIAELLRREGLNFGMRVEDLNGELKITNEGTPPVAQPSEGGEE*