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13_1_40cm_4_scaffold_1124_18

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(17974..19776)

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 601.0
  • Bit_score: 648
  • Evalue 7.50e-183
Lipid A export ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A621_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 595.0
  • Bit_score: 489
  • Evalue 4.10e-135
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 603.0
  • Bit_score: 553
  • Evalue 6.60e-155

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1803
ATGGGCCGCAGCGCCCGCGTCCTCGGCCTGCTCCGCCCCTACAGGTTTCTCTTCGCCGCCAACATCGCCGCCACGCTGGTGGCGTCGCTCATGGATGGGGCGACGTTCGTGCTGTTGATTCCCTTCCTCCGCGCCTTGTTCAAGCTGCAGGCGTTGCCGCCGACGGGCTCCTCCGCGGTGGAGCAGGTGCTCGGCCGGGTCGCCGGGCCGCTGCTCACGGTGGGGGCGCCCGAGGTGGCACTGCGCAACGTGGTCCTGGTGCTCCTCGTCGCGCTCGTGATCAAGAACGCGGCTGCCTACGCGGCCGCGATGAGCAGCGTGGCGATCGAAGAGGGCGTGGTGCGCGACCTGCGGGTCCGCCTGTTCCGCCACCTCCAGAGCCTGCCGCTCGGGTTCTTCCAGCGCACCAAGGGCGGCCAGCTGCTCGCCCGCATCATCAGTGACACCGATCAGGTCAAGACCGCGGTCACCGCGGCCCTCGCCTCGTTCCTCCGCAACGTGAGCCTGATCCTCGTGTACCTCGCGATCCTCATCGGCCTCTCCTGGCGGCTCGCGATCATCACGCTGGCCCTCGCCCCGGTCCTCGTCTTCACCATCCGCCCGCTCGTCGCGCGGGTGCGGCGCCGCTCGCGTGAGCAGGCGGACGACCGCGGCGAGCTGACGAGCCTCGTGAGCGAGATGGTGGCGTCGGTGAAGCTGGTGCGCGCCTATGTCGCCGAGGCGTTCGAGGTCGAGCGGTTCCAGCGCCTCGCCAACCGGTACCGCAAACGGGTGCTGCGCGCGCAGGCCGCGTCGACCCTGACAAGCCCGGTGAGCGAGATCTTCGCCGGCATGGTCATCGTGCTGATCCTCCTGGTGGGGACGCGTCTCGCGCTGGGGGCGTCGGCGTCGCTGCGGCCCGAGGTGTTCATCGCGTTCATCTTCGTCGCGCTGCGGCTCATGTCGCCGATCAAGGCGGTGGCGCAGTACCCCACGATCATGGGGGGCGCGGTCGCGGCGGCCGACCGCTGCTTCGAGGTGCTCGACGTCCCGGCGGACGAGGGCGACCGGCCGGGCGAGACGCCGGCCCGCTTCGGCGACTGCATCGAATACCGCGGCGTGACGTTCTCCTACGACGGCGAGGCTCCGGTGCTGCGCGACGTGGACCTCGAGGTGCGGCGTGGTCAGGTCGTCGCCATCGTGGGGCCATCGGGGGCGGGGAAGACCACCCTCGTGGACTTGCTGCCGCGCTTCTACGAGCCGACGGGCGGCCAGATCCTCATGGACGGCGTGCCGGTCACCCGCTTCACCCGGCGCAGCCTGCGGGCGTTGATGGGGATCGTGTCGCAGGAGACCGTGCTGCTCAACGACACGGTGCACGCGAACATCGCGTACGGCCGTGGGGGCTTCACGCTCGAGCAGGTACGCGCCGCCGCCCAGGCCGCGAACGCGGACGAGTTCATCGCCCAACTCCCGCAGGGCTACGACACGCTGTTGGGCGAGCGCGGCACCCGGCTCTCCGGCGGGCAGCGTCAGCGCATCGCGATCGCGCGGGCCCTGCTGCGCGACCCGCCGCTCCTGATCCTCGACGAGGCCACCAGCGCCCTCGACACCGAGTCCGAGCGGCTCGTGCAGGAGGCGATCGACCGCCTGATGGCGCACCGCACGGTGCTCGTGATCGCACACCGCCTCGCGACGGTGCGCCACGCGGACCTGATCGTCGTGCTCGCCGACGGCCGGCTGGTCGAGCGCGGCACGCACGACGGGCTGTTCGCGGCGGGGGGGCTGTACCGCCGCCTGTACGACCTGCAGTTCCGCGCCTGA
PROTEIN sequence
Length: 601
MGRSARVLGLLRPYRFLFAANIAATLVASLMDGATFVLLIPFLRALFKLQALPPTGSSAVEQVLGRVAGPLLTVGAPEVALRNVVLVLLVALVIKNAAAYAAAMSSVAIEEGVVRDLRVRLFRHLQSLPLGFFQRTKGGQLLARIISDTDQVKTAVTAALASFLRNVSLILVYLAILIGLSWRLAIITLALAPVLVFTIRPLVARVRRRSREQADDRGELTSLVSEMVASVKLVRAYVAEAFEVERFQRLANRYRKRVLRAQAASTLTSPVSEIFAGMVIVLILLVGTRLALGASASLRPEVFIAFIFVALRLMSPIKAVAQYPTIMGGAVAAADRCFEVLDVPADEGDRPGETPARFGDCIEYRGVTFSYDGEAPVLRDVDLEVRRGQVVAIVGPSGAGKTTLVDLLPRFYEPTGGQILMDGVPVTRFTRRSLRALMGIVSQETVLLNDTVHANIAYGRGGFTLEQVRAAAQAANADEFIAQLPQGYDTLLGERGTRLSGGQRQRIAIARALLRDPPLLILDEATSALDTESERLVQEAIDRLMAHRTVLVIAHRLATVRHADLIVVLADGRLVERGTHDGLFAAGGLYRRLYDLQFRA*