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13_1_40cm_4_scaffold_16408_2

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(117..668)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A927_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 185.0
  • Bit_score: 158
  • Evalue 8.70e-36
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 184.0
  • Bit_score: 209
  • Evalue 3.50e-51
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 185.0
  • Bit_score: 158
  • Evalue 2.50e-36

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGGCCCAAACCCAACCGGTCGCCGCGCCGATGCCGGACGCGGCGCTGATCGCCGCATGGCAGCGAGGCGACGAGCAGGCGGCGGCCGAGCTGGTCCGGCGCCATGCACAGGCGTTGGCGCGGTTCCTCGCCGGGGCGGGGGCGCCCGAGGCGGACCTGGACGATCTGGTCCAAGAGACCTTCATTCGGGCCTTCCGGGCGGTGGGCAAGTTTCGCGGCCAATGCCAATTCCGGACCTGGCTGCTGACCATCGGCGGCAACGTGCTGAAGGACGCCGGGCGCCGCCGGGCCCGCCACAAGGTGGTGCCGCTGGAGGATACGCTACGGACGCCGGACGGCGACCCGTACGAGCAAGCAGTGGCGGGGGAGGTGGAAGGACGGCTGGGCGAGGGTCTCGGCCGGCTGCCGCGAATGCAGCGCGAGGTATTCCTGCTGCGCGCGCAGCAGGGGCTCGAATACGATGAGATCGCGGCGGCGCTCGGCACGAGCGCGGGAGCGGCCCGGGTACATTACCACCACGCCGTCAAACGCTTGAAGGAGTACTTGCAGTGA
PROTEIN sequence
Length: 184
MAQTQPVAAPMPDAALIAAWQRGDEQAAAELVRRHAQALARFLAGAGAPEADLDDLVQETFIRAFRAVGKFRGQCQFRTWLLTIGGNVLKDAGRRRARHKVVPLEDTLRTPDGDPYEQAVAGEVEGRLGEGLGRLPRMQREVFLLRAQQGLEYDEIAAALGTSAGAARVHYHHAVKRLKEYLQ*