ggKbase home page

13_1_40cm_4_scaffold_23232_7

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(4924..5700)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJH6_IGNAJ similarity UNIREF
DB: UNIREF100
  • Identity: 29.8
  • Coverage: 205.0
  • Bit_score: 103
  • Evalue 3.60e-19
Lipopolysaccharide biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 264.0
  • Bit_score: 149
  • Evalue 8.00e-33
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 219.0
  • Bit_score: 133
  • Evalue 9.20e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 777
GTGTTGCGGAGCCGTGAGCTGCTCGAGCGCGTCTTGCTCGCGCGCTATGCGCCCCCCGGTGCCAACGAGGGCACGGTCGACTCCACCACGCTGCTCCGGATCCTGCGAGTCAAGGGGCGCACGCCGGCGGACAGCCTGGCGCGGGGGGTGAAGCGGCTGAACCGACGCGTCTCCGTCCGCGTGGACAATCAAACCAACATCGTACGCGTGAGCGTCGACGCAGCAGGCCCGGAGCTGGCCGCGGCCGTGGCCAACCGTCTGGTGCAGTACCTCAACGAATTCAACACCCTGAAGCGGCAGTCGCGGGCGCGCTGGCGCCGCCGCTTCACCGAGGAGCGCGTCGCTGCGGCTGACAGCGAGCTGCGGCGCGCCGAGGAGGCGGTGAAGACGTTCTACGAGCGCAACCGCGGCTGGCAGGAGGCGCCGGAACTCGCGTTCGAGCAGACCCGCCTGCGGCGCCAGGTGGATGTCGGGCAGGAAGTCTATCTGACGCTGAAGCGGGACTATGAGACGGCGCGCGTCGAAGAGGTGAACGACACCCCGGTCATCACGGTCGTCGACCTCGCCGTGCCGCCACCGCGAAGGTCGCACCCCGACCTGGCGCTGCTCGTTCCCCTCGCGGTCGTCCTGGGCGGCATGGTCGCGGCGTTTGGGGCCTTCGCCGCCGAGCAGATGAGCAAATTGCGTCGCGACGAGGACGACGAGTACCGAGAGTTCGCCGGCCTGCTGCGGCACGCACGGCAGCGCGTTTCGCGCCTCATTCGGGTACGCCGGTAG
PROTEIN sequence
Length: 259
VLRSRELLERVLLARYAPPGANEGTVDSTTLLRILRVKGRTPADSLARGVKRLNRRVSVRVDNQTNIVRVSVDAAGPELAAAVANRLVQYLNEFNTLKRQSRARWRRRFTEERVAAADSELRRAEEAVKTFYERNRGWQEAPELAFEQTRLRRQVDVGQEVYLTLKRDYETARVEEVNDTPVITVVDLAVPPPRRSHPDLALLVPLAVVLGGMVAAFGAFAAEQMSKLRRDEDDEYREFAGLLRHARQRVSRLIRVRR*