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13_1_40cm_4_scaffold_2496_19

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(18713..19351)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 195.0
  • Bit_score: 282
  • Evalue 3.60e-73
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 212.0
  • Bit_score: 366
  • Evalue 2.60e-98
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 75.1
  • Coverage: 205.0
  • Bit_score: 307
  • Evalue 3.80e-81

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 639
ATGCGGGCAGTCCTCAAACTCACGAGCAAGCCGGGCGCGCGGGCGCTGGAGCGGGCGGCGCTCCACGATCTCGACGACGGCCAGGTGGCGCAGCGCCACCTCGGAGGCGACCCGCAGGCGTTCGGCACCCTGGTCGACCGCTACCAGACGCGCCTGCTCAACTTCGTCAACCGCACGATCGGGGACCGGGAGCGGGCCGAGGACCTGGTGCAGGAAGTGTTCATCCGGGTGTTCCGGCACCTGCACCGGTTCGACCAGACCAAGAAATTCTCGACGTGGATTTACACGATCGCGTCGAACCTGGCCAAGAACGAGCTGCGCAACCGCAGCCGCAACCCGCTGGTGCTGTTCCAGACGATCAAGAAGAACTGGGAGGCCGACCACCGGCCGTTGCAGTTCGAGGACACGACCGCGCGGCCCGACGATCTCTACCGCAAGCGGTTCCTGAAGGACGCGGTGGATCAGTGCGTGTGCCAGCTGCCCCAACATCACCGGGTGGTGTTCGTGTTGCGCGAGCTCGAGGGCAAGAGTTATCAGGAGATCGCCGAGATCACCGCCTGCAACCTCGGCACCGTGAAGAGCCGGCTCAACCGGGCCCGGAACAGCTTCGCTCAGCTGATCGCGCCGCTGCTGAAGTAG
PROTEIN sequence
Length: 213
MRAVLKLTSKPGARALERAALHDLDDGQVAQRHLGGDPQAFGTLVDRYQTRLLNFVNRTIGDRERAEDLVQEVFIRVFRHLHRFDQTKKFSTWIYTIASNLAKNELRNRSRNPLVLFQTIKKNWEADHRPLQFEDTTARPDDLYRKRFLKDAVDQCVCQLPQHHRVVFVLRELEGKSYQEIAEITACNLGTVKSRLNRARNSFAQLIAPLLK*