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13_1_40cm_4_scaffold_289_13

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(16130..17986)

Top 3 Functional Annotations

Value Algorithm Source
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 616.0
  • Bit_score: 839
  • Evalue 3.10e-240
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 608.0
  • Bit_score: 802
  • Evalue 3.90e-229
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 592.0
  • Bit_score: 756
  • Evalue 5.30e-216

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1857
ATGGCCGACGCTGCGACGCGACCCAGCAAGCCTGCGATTACCCCCGGCGCCTGGCAGGAAGCCCGGGGCCTGATCTACGCCCACCGCAAGCGGCTGTCGCTGGGGCTCGTGCTCCTGCTCGTCAACCGGATCGCGGGGTTCGTGCTGCCCGCGTCCCCCAAATGGGTCATCGACCGCGTGATCGGCCAGCACCGCCCGGAGCTGCTCCTGCCGCTGGCCGTGGCCGCGGGCGTGGCGACGCTGGTGCAGGCGGCCACCGGCTTCGGCTTGTCGCAGATCCTCGGGGTCGCGGCGCAGCGCGCCATCACCGACATGCGCCGCACGGTCCAGGCGTACGTCCTGCGTCTGCCGGTCAGCTACTTCGATTCGACCAAGAGCGGCATCCTCATCTCGCGCATCATGACCGATGCCGAGGGCATCCGCAACCTCGTCGGCACGGGACTGGTGCAGCTGATCGGCGGCTTGCTCACGGGAGCGGCGGCGTTGGTCGTCCTCTTCTTCCTGAACTGGCGGCTCACGGCGATCGCGATCCTCATTCTCGGCTGCTTCGGCGGCGGCATGGCGTTCGCGTTCACCAAGCTGCGGCCGCTGTTCCGGGAGCGCGGCAAGCTCAACGCCGAGGTGACGGGACGGCTCGGCGAGACGCTCGGCGGCATCCGCATCGTCAAGGCCTACCGCGCGGAGCGGGGCGAGCGGCTGGTGTTCACGCGGGGCGCGAACACCCTGTTTCGCAACATCGCCGCCACGATGACGGGTATCTCCGCCGTGGGCTCGTTCGCCACACTCATCGTCGGCGCCATCGGCATCCTGATGATCCTGGAGGGCGGTCATGCGGTGCTCACCGGCGCCATGACGCTGGGCGATCTCTTCATGTACGCCATCTTTGTCGGCCTCGTGGCGCTGCCGCTCATCAACATCGCGTCGATCGGGACGCAGATCACCGAGGCGTTCGCGGGCCTCGACCGGATCCGGGAGATCCGCCGGCTCGCGACCGAGGACGCCGAAGACGGCGCCCGTCCAGCGCTGGCGGAGGTGGAGGGGGATGTCGTCTTCGACGCTGTGAGCTTCGCCTACGTGCCGGGGAAGGACGTGCTACGACACGTCTCGTTCCACGCGCCCCCCGGCTCCACCACGGCGCTCGTGGGGTCGTCAGGGGCGGGGAAGAGCACGCTCATCAGCCTGGTGCTCGCGTTCAGCCGCCCCGGCGCCGGGCGCGTCCTGGTGGACGGACGCGACCTCGCCACAGTGCGGCTGGCCGAGTATCGCCGGCAGCTGGGGGTCGTGCTCCAGGACAACTTCCTGTTCGATGGCACGATCGCCGAGAACATCGCGTTCGCCCGCCCCCACGCGACGCGCGAGGAGATCGACGCGGCAGGCCGCATCGCCCACTGCGACGACTTCGTGCGCCGTTTCGAAAAGGGCTACGACACGGTCGTCGGCGAGCGGGGCGTGAAGCTGTCGGGCGGCGAGCGCCAACGGGTCTCCATCGCGCGGGCGATCCTGGCCGATCCGCGGATCCTGATCCTCGACGAGGCCACGTCCAGTCTCGATTCGGAGAGCGAGGCGGCCATCCAAGACGGGCTGCGCACGCTGCGGCGCGGTCGCACGACCTTCGTGATCGCTCACCGGCTTTCGACCATCCGCAGCGCCGAGCAGATCCTAGTGATGGAAGGGGGCGAGATCGTCGAGCGCGGCACCCACGCGGAGCTGCTGGCGAAGCACGGGCGCTATCGCCAGCTGTACGATAAACAGTACCACTTCGAGCAGGACCTGTTCATCAACCCCGGCGAAGACTTCACGCCGGAGCCCGAAACGCCGGTGGTGACGACCCCGGTAACCCCGCCTACCAGGCTCTGA
PROTEIN sequence
Length: 619
MADAATRPSKPAITPGAWQEARGLIYAHRKRLSLGLVLLLVNRIAGFVLPASPKWVIDRVIGQHRPELLLPLAVAAGVATLVQAATGFGLSQILGVAAQRAITDMRRTVQAYVLRLPVSYFDSTKSGILISRIMTDAEGIRNLVGTGLVQLIGGLLTGAAALVVLFFLNWRLTAIAILILGCFGGGMAFAFTKLRPLFRERGKLNAEVTGRLGETLGGIRIVKAYRAERGERLVFTRGANTLFRNIAATMTGISAVGSFATLIVGAIGILMILEGGHAVLTGAMTLGDLFMYAIFVGLVALPLINIASIGTQITEAFAGLDRIREIRRLATEDAEDGARPALAEVEGDVVFDAVSFAYVPGKDVLRHVSFHAPPGSTTALVGSSGAGKSTLISLVLAFSRPGAGRVLVDGRDLATVRLAEYRRQLGVVLQDNFLFDGTIAENIAFARPHATREEIDAAGRIAHCDDFVRRFEKGYDTVVGERGVKLSGGERQRVSIARAILADPRILILDEATSSLDSESEAAIQDGLRTLRRGRTTFVIAHRLSTIRSAEQILVMEGGEIVERGTHAELLAKHGRYRQLYDKQYHFEQDLFINPGEDFTPEPETPVVTTPVTPPTRL*