ggKbase home page

13_1_40cm_4_scaffold_3056_5

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: 1910..2614

Top 3 Functional Annotations

Value Algorithm Source
putative uracil-DNA glycosylase (EC:3.2.2.-) Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 231.0
  • Bit_score: 350
  • Evalue 1.60e-93
Putative Uracil-DNA glycosylase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAL0_9BACT id=5225461 bin=16ft_combo_ws3_JS1 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 231.0
  • Bit_score: 350
  • Evalue 1.20e-93
uracil-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 227.0
  • Bit_score: 285
  • Evalue 1.70e-74

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 705
GTGACGGGTCTCGCGGCCGGCTCGCTCGGGGCCGTGCACCGCGCCGTCGTCGCCTGCGAGCGCTGCCCCCGGCTCCGCGCTTACTGCCGCCGCGTCGCCCGCGAGAAGAAGCGCGCGTTCCGGGACTGGACCTACTGGGGGAAGCCCGTGCCCGGGTTCGGCGACCCGCGGGCGCGGCTGCTCATCGTCGGGCTCGCGCCCGCGGCGCACGGCGCGAACCGCACCGGCCGCATGTTCACGGGCGACTCGAGCGGCAGCTGGCTGTACGAGGCGCTGCACCGTTTCGGGTTCGCGAACCAGGCGCGCGCGCTCACCCGGGACGACGACCTCGCGCTCTCCGACTGCTACGTCACCGCCGCCGCCCGCTGCGCCCCGCCCGGCAACAAGCCGACGCCCGCCGAGCTCGCCAACTGCCGTCCTTACCTGGAGGCGGAGTTGCGGCTGCTTCCGCGGGTGCGCGTGGTGCTCGCGCTGGGCCGGATCGCTCACGACGCCTGGCTCAGAGCCGCCGGCTGGTGGAGCCGGCTCGCGCCTGCCGCGCGCCCCAAGTTCCGCCACGGCGCCGTGACGCGTCTTCCCGACGGCACGATCCTGATCGCGTCCTACCATCCGAGCCGGCAAAACACCAATACGGGCAAGCTGACGCGGGCCATGTGGCGCGCCGTGTTCCGGCGCGTCCGGTCGCTCGTCGATTCGATCCGCTGA
PROTEIN sequence
Length: 235
VTGLAAGSLGAVHRAVVACERCPRLRAYCRRVAREKKRAFRDWTYWGKPVPGFGDPRARLLIVGLAPAAHGANRTGRMFTGDSSGSWLYEALHRFGFANQARALTRDDDLALSDCYVTAAARCAPPGNKPTPAELANCRPYLEAELRLLPRVRVVLALGRIAHDAWLRAAGWWSRLAPAARPKFRHGAVTRLPDGTILIASYHPSRQNTNTGKLTRAMWRAVFRRVRSLVDSIR*