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13_1_40cm_4_scaffold_41_25

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(22364..23164)

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=12555519 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 44.8
  • Coverage: 281.0
  • Bit_score: 197
  • Evalue 1.40e-47
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 274.0
  • Bit_score: 196
  • Evalue 4.50e-47
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 267.0
  • Bit_score: 194
  • Evalue 3.50e-47

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Taxonomy

Frankia sp. EUN1f → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 801
GTGGTCGATCAGGTGCGCCGCGCGCTCGCCACCCGGCGGGTCGGACACCTCGGTACGCTCGATCCGTTCGCGGCGGGGCTGTTGGTGGTCGTCGTGGGTCGCGCGACCCGCTTGGCGCCGTACGCCGCCGGCTGGGCCAAGGCGTACGAGGGTGTCATCCGGCTGGGGCGCACGACGTCGACCGACGACACCACGGGCCACACGACGGCGATCTCGGACGCGTGGCAGTCGCTTGACGAGGCGCAGGTGGAGGCGGCGCTGGCGCGGTTTCGCGGCGCTTACCAGCAGCAGCCGCCCGCCTACTCGGCGGTGAAAGTCGCCGGTGAACGGGCGTACCGGCGCGCCCGGCGCGGTGAGGCGGTCACTCTGGCGCCCCGGAGGGTGGAGGTGCAGCTCCTCGAGCTGGTGGGCCTGGAGCCGCCGGACGTGCGGTTCCGCGCCACCGTGAGCGGCGGTACCTACCTCCGCAGCCTCGCGCGCGACGTGGGGGAGGAGTTGAAGTGTGGCGCGCACCTCGCGGTGCTCGTGCGCACTCAGGTGGGTCCGTTCGGGCTCGACGACGCGGTGGAGCCGGAGGCGCTGACGGCCGGGGACCTGCGAGATCCCGCGACGCTGGTGGCCGGGCTGCCGCGGCGGGAGCTGGATGAGGCGGGGCGAGTCGCGGCGATTCACGGGCGGCCGGTCCCCGCCGGGAAGGGAGAAGAGGGAAGGGTGGCCCTCTTCGCAGCCGGCCACCTGGTGGCCGTGGCCGACCGCGAGGGAGAGCTGCTGAAGCCGCGCGTCGTGGTGGCGGACGAATGA
PROTEIN sequence
Length: 267
VVDQVRRALATRRVGHLGTLDPFAAGLLVVVVGRATRLAPYAAGWAKAYEGVIRLGRTTSTDDTTGHTTAISDAWQSLDEAQVEAALARFRGAYQQQPPAYSAVKVAGERAYRRARRGEAVTLAPRRVEVQLLELVGLEPPDVRFRATVSGGTYLRSLARDVGEELKCGAHLAVLVRTQVGPFGLDDAVEPEALTAGDLRDPATLVAGLPRRELDEAGRVAAIHGRPVPAGKGEEGRVALFAAGHLVAVADREGELLKPRVVVADE*