ggKbase home page

13_1_40cm_4_scaffold_445_8

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(7365..8537)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly protein PilC n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA12_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 386.0
  • Bit_score: 535
  • Evalue 4.30e-149
pilC; type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 366.0
  • Bit_score: 604
  • Evalue 8.10e-170
Type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 383.0
  • Bit_score: 535
  • Evalue 9.30e-150

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1173
GTGAGCCATGCCGGTTTTCCAGAGATCGACCTGCCGAGCCGTGACGACGTCATCGCCCACCTGCGCAAGAACCGCATGGTGGTGGTGCAGGTGCGGGCCGCGCCGCGCGAGTTCAAGCTCAACTTCAAGATCGGCGGCGGCGTCAAGACGCGCGACATCGTGGTGCTCACGCGGCAGTTCGCCACCATGATCAACGCCGGCCTGCCGCTCGTCCAGGCGCTCGACATCCTGGCGCAGCAGACCGAGAACAAGATCCTCGCGGACGTCACCCGCCAGGTCGTCTACGACGTCGAGAGCGGTCACACCCTGGCCGACGCGCTGCGCAAGCACCCGCGGGCGTTCAGCGACCTCTACGTCAACATGGTCGCCGCCGGCGAGGCGGGCGGTATCCTCGATACCATCCTCGTGCGCCTGGCTCAGTTCCTCGAGAAGAACGACGCCATCGTCCGGAAGGTGAAGGGCGCGATGGTCTACCCCGCCGTGATTGTGTCGGTGGCCGTCATCGCGGTGTCGGTGCTGCTCATCTTCGTGATCCCCACCTTCCAGAACATGTTCGCGTCGGTGAACCTCGAGCTGCCGCTCCCGACCCGGATCGTGATCGGCATGAGCAACCTGCTCAAGAACTACTGGTGGGCGATCCTGGGCGTCGCCGGCGTGCTCGTGTTCGGCATCACCCGGTATTACAAGACGGCGCCCGGCCGGCTGCAAATCGACGCGATGCTGCTGAGAATGCCGGTGCTGGGCGACGTGCTGCGCAAGTCCGCGGTGTCGCGGTTCACGCGCACCCTCGGCACGCTGATCTCGTCGGGCGTGTCGATCCTGGACGGCCTCGAGATCACGGCCCGCACGGCGGGGAACATGGTGATCCACAACGCGGTGATGGACTCGCGCGCCTCGATCGCCGGCGGCGAGACGATCGCCCAGCCGCTCGCGAAATCCAAGGTGTTCCCGCCGATGGTCATTTCCATGATCGCGGTCGGCGAGCAGACCGGCGGCATGGACGAGATGCTCTCCAAGATCGCGGACTTCTACGACGACGAGGTGGACGCCGCGGTGAGCACGCTGCTGTCCCTCATGGAGCCCATCATGATCGTGGTGCTCGGCGTCGTCGTCGGCGGCATGGTCGTCGCGATGTACCTCCCGATCTTCGACATGGTGAACGCGGTGCAATAA
PROTEIN sequence
Length: 391
VSHAGFPEIDLPSRDDVIAHLRKNRMVVVQVRAAPREFKLNFKIGGGVKTRDIVVLTRQFATMINAGLPLVQALDILAQQTENKILADVTRQVVYDVESGHTLADALRKHPRAFSDLYVNMVAAGEAGGILDTILVRLAQFLEKNDAIVRKVKGAMVYPAVIVSVAVIAVSVLLIFVIPTFQNMFASVNLELPLPTRIVIGMSNLLKNYWWAILGVAGVLVFGITRYYKTAPGRLQIDAMLLRMPVLGDVLRKSAVSRFTRTLGTLISSGVSILDGLEITARTAGNMVIHNAVMDSRASIAGGETIAQPLAKSKVFPPMVISMIAVGEQTGGMDEMLSKIADFYDDEVDAAVSTLLSLMEPIMIVVLGVVVGGMVVAMYLPIFDMVNAVQ*