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13_1_40cm_4_scaffold_4898_7

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: comp(5109..6566)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 499.0
  • Bit_score: 636
  • Evalue 2.20e-179
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 488.0
  • Bit_score: 769
  • Evalue 4.00e-219
RNA polymerase sigma-54 factor, RpoN similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 492.0
  • Bit_score: 658
  • Evalue 1.50e-186

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Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1458
GTGAAGACGGGCCTGCATCAGCACACGGCGCTCAGGCAGGACCTGCGCATCAATCCACGCCTCTACCAGGCGATGGATCTGCTGTACATGCCCCTGCTCGACCTGCAACAGCACCTCAAGCAGGAGCTGCTCGGCAACCCCTTCCTCGAGCTCCTCGAGCCCGAAGAGGAGGAGGAGACGCCGGTCGCCCAGGAGGCCCAGGCCGAGAAGGAGAAGAAGGGGGACGACGAGCCCGACTGGGAGAACATCCTGCTGGACGATGGTGCCGAGGCGCTCGCCGGCTCCCGCGACCTCAGTGAGGCGCGAGAGTACGTCGAGCCGGTGCCGGTGGAGACCAAGGATCTGTCCGATCATCTGCGGGATCAGGTGCAGATGCTCGACCTCACGCCCCGGCAGCGGCTGCTCGCCGACGAGTTCCTCGGCAACATCGCGGAGGACGGCTATCTCACCGCCACTCTGGAAGAGATCATCAAGGGCGCGAATCAGCTGCTCGAAGAGCACGCCGCCGAGTCGGAGGTGGAGCTCACCGTCCAGCACTACACGCTGGCCGACGCCGAGGAGATGCTCAAGATCGTGCAGACGCTCGACCCGCCCGGCGTGGGAGCGCGCGACCTGCGCGAGTGCCTGCTGCTGCAGCTCGAGGACCAGAAGCGCACCGACACGCTCGCGTACCGCCTTGTGAAGGAGGCCTGGGAAGACCTGAAGGCGCACCGCTGGAGCGACATCGGCAAACGCTACGGCCTCTCGCCGGAGGAGGTGCAGCGGGCGGCCGACGACATCGCCAAGCTCGATCCCAAGCCGGGACTGCAGTACAGCGCAGCGAGCGACGTCTACATCATCCCCGACCTCGTGGTCCAGAAGATCGACGACAAGTACCACGTCTTCCTGAACGACTCGGGACTGCCCCGGCTGCGGATCTCCAAGACGTACCAGGACATTGCGCGCGACAAGAAGCAGTACCAGGGAGAGAACAAGGAGTTCATCAACCAGCGCCTCAACAGCGCCCACTGGATGATCCAGGCGATCGAGCAGCGGCGCCAGACCATGCTCAAGGTGATGAACTTCATCGTGGACCGGCAGCGCGAGTTCTTCGAGAAGGGCGTCGAGTTCCTGAGGCCGCTCACCCTGCGGGAGGTGGCCGAGGTGATCGGGATGCACGAAAGCACAGTGAGCCGCGTGACCAACGAGAAGTACGTCCAGACTCCGCGCGGGCTGCTGCCGCTCAAGTTCTTCTTCTCGAGCGGCCTCTCGACGACCACGGGAGAGGACGCTAGCGCGCGGAGCATCAAGGCGCAGATCGAGAAGATGGTGACCGAGGAAGACCAGAGGAATCCGCTGACCGATCAGCAGATCGTGGAGTTGTTCGCCCGGCGCGGCGTCAAGATCGCCCGCCGCACGGTGGCGAAGTACCGCGACCAGCTGGGCGTGCTGCCGGCCCGCATGCGCAAGCGGCTATGA
PROTEIN sequence
Length: 486
VKTGLHQHTALRQDLRINPRLYQAMDLLYMPLLDLQQHLKQELLGNPFLELLEPEEEEETPVAQEAQAEKEKKGDDEPDWENILLDDGAEALAGSRDLSEAREYVEPVPVETKDLSDHLRDQVQMLDLTPRQRLLADEFLGNIAEDGYLTATLEEIIKGANQLLEEHAAESEVELTVQHYTLADAEEMLKIVQTLDPPGVGARDLRECLLLQLEDQKRTDTLAYRLVKEAWEDLKAHRWSDIGKRYGLSPEEVQRAADDIAKLDPKPGLQYSAASDVYIIPDLVVQKIDDKYHVFLNDSGLPRLRISKTYQDIARDKKQYQGENKEFINQRLNSAHWMIQAIEQRRQTMLKVMNFIVDRQREFFEKGVEFLRPLTLREVAEVIGMHESTVSRVTNEKYVQTPRGLLPLKFFFSSGLSTTTGEDASARSIKAQIEKMVTEEDQRNPLTDQQIVELFARRGVKIARRTVAKYRDQLGVLPARMRKRL*