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13_1_40cm_4_scaffold_5063_4

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: 2723..6022

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=861299 species="Bacteria; Ge similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 999.99
  • Bit_score: 1252
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 999.99
  • Bit_score: 1228
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 999.99
  • Bit_score: 1252
  • Evalue 0.0

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 3300
ATGGCGCTCGATTTCCTGCTCGACCGCTTCGACGACCTGCCGGCGACCCGGGCGCTCGCCGAGGGCCTCCCGTCTCCCGGCTCATGTCTCTCGCTGGCAGGCCTTCCCGGCTCCAGTGCGGCTGTGCTGGTCGCCGCCTTGGCCCGCCGCTTCCCACAGCGGGTGTTCGCCGTGGTTGCGCCGACGCCGACCGACGCCGAGCGCTGGCTGGCGGACGTGCAGACGTTGCTCGCCGAACGTGCCGCGCTCTACCCGCAGCGCGAGGGCCTGGGAGCGGAGGAGCCGCACTTTGAGATCGCGGGCGAGCGGGTCGAAACGCTCGAGGCGCTGCTCGCGGGCCGGGTGCGGGTGCTCGTGACGACCGCCCGCGCGAGCGCGGAGCGGACGGGGGTGCCGGCGGCGCTCGAAGCGTCCCGGTTGGTGCTGTCGTCGGGAGGCGGGAAGCGGGAAACGGGAAGCGTGTCGCTGAGCGGAGCCGTCGGCCGACTGAGCGAGATGGGCTACGAGCGGGTCGGCATGGTCATTGACGTCGCGCAGTTCAGCGTGCGCGGTGGGATCCTGGATGTGTACGGGTTCGGGATGGGGGCGCCGGCCCGAATCGAATGGTGGGGTGACGAGATCATCTCGCTCCGGACCTTCGACCTCGACACGCAGCGCTCCGGCGGGGAGATCGAGCGCGTGACGATTCTCCCCGTGAAGACCGAGGGGAGCGGGGAGCGGGGAGCCGGGAGCGGAACGCGCAGCTCGCTGCTCGAGCTCCTGCCGACGGATACGCTCGTCCTCGTCGACCAGGAGTCCGCCGTCGCGCGCGAGGTGGAGCGCGCCTGGAGCGACGCCGCGCATCATCTCGAGGTCGCGCGCCGCTTGGGCGAAGAGCCGCCGGTGCGTGAGGAGCTCCTGCTCGCTCCCGATGCTTGGCGAGCGCACATGGACCGCTTCGCCCGGCTGGCACCGGGTGCCGGCGACGCCAAGGCGCGGTTTCCGCTTACGCCGCCCGAGGCCATCGACCGCGACCTCAAGCTGCTGCGGCGGCTGGTGGCGGGGGAGCCGCCGACCGTCATTCTGTGCGACAACGAGGGCCAGCTCGAGCGGCTCGAGGAGCTGCTGGGCGCGGGCCGCGCCACGCTCGCGCTGGGCGCGCTGGACGGGGGCTTCGTGCTGCCGACCCTGCGCGTCCTCACCGACCACGAGATCTTCCGCCGTGCCCGCCGGCTGCGGCGCCCGCGCCGCTACCGGTCAACCTCCCCCAGCGCCGCCGCCGCCGCGGGGGCGGAGGCGCTCACGCTCGGCGGCTACGTGGTCCATCTGGAGCACGGCATCGGCATTTACCGCGGGCTGCAAACGATCGCCGTCGGCGACGGGACGCTGGATGTGGCGGTGCTCGAGTACGAGGGCGGCGACCGACTCAACGTCCCGCTGTATCGCCTCGACCAGCTCGAGCCCTACCGCGCGGCCGGGGACGGCGACGCCCCACCTCCCAGACTGCACCGGCTTGGCGCCACCGCCTGGCAGCGGCAGCGCGACCGGACGCGGGCGGCGATCCGCAAGATGGCCGGCGAGCTGCTCGAGCTGTACGCCCGCCGCCAGCTCGCCTCGGGGTACGCGTTCCCTCCCGACACCCCGTGGCAGCGGGAGCTCGAGTCCGCCTTCCTTTATGAGGACACCCCGGACCAGCGCCGCGCCGCGGCGGAGGTGAAACGGGACCTGGAGCGGCCGCGACCGATGGACCGGCTGCTGGTCGGGGACGTCGGCTACGGCAAGACCGAGGTCGCGCTGCGCGCCGCCTTCAAAGCGGTGCAGGCCGGCAAGCAGGTGGCGGTGCTGGTGCCGACGACGATTCTCGCCGAGCAGCACGGTCGCACGTTCCGCGAGCGGCTGGCCGACTATCCCGTGCGCATCGAGGTGCTGTCGCGCTTCCGGAGCGCGAAGGCATCCGTGGCTGCGGTGCGCCAGCTCGCCGCCGGCGCCATCGACATCGTGATCGGCACGCATCGCCTGCTGTCGCGCGACGTGGTCTTCAGGGACTTGGGGCTCCTGGTGGTGGACGAGGAGCACCGCTTCGGGGTGCGGCACAAAGAGCGGCTAAAGGCCCTGAAGCTGTCGGTAGACGTACTCACCCTCACCGCGACGCCGATCCCGCGCACGCTGCATCTCTCGCTCGCGGGGCTGCGGGACCTCACGCTGCTGGAGACGCCGCCGAAGGACCGCTCCCCGGTGCTGACGTTCATCGAGCCGTGGGACGACGCGTTGCTGGAAGAGGCGCTCGCGCGCGAACTCGACCGGGGCGGCCAGGTGTATTTCGTGCACAACCGCATCGAGACGATCGCGACCATCGCCGGGCGGGTGCGGCGGCTGGCACCGCGCGCGCGAGTCGCGGTCGCGCACGGGCAGCTGCCGGAGGCGGAGCTGGACGCCGTGATGTCGCGGTTCGTCCGCGGCGAAGTGGACATCCTGGTCTCGACGATGATCGTGGAATCGGGCCTCGACGTGGCGAACGCCAACACGATGGTGGTGGATCGCGCCGACCAGCTCGGCCTCGCCCAGCTCTACCAGCTGCGGGGCCGGGTGGGGCGCAGCCACCGCCGGGCCTCCTGCTACCTGTTGGTGCCCGACCTCGTGGACGCGGAGGCCGAGGAACGGTTACGGGTGCTCGAGCATCATACCGATCTGGGGGCGGGCTACCGGATCGCCTTGCGGGATCTCGAGCTGCGGGGGGCGGGGAATCTGCTCGGCGCCGAGCAATCGGGACACGCGCAGGCGGTGGGGTTCGACATGTATCTGCGCTGGCTCGAGGACGAGGTGAGAGTTTTGAAAGGGGAGCGGCGACCGGGCAGTGGGGAGCAGTGGAGCCCGCCCGACGTCACGCTCGACCGGCCGGCGCATCTGCCGGAGGAGTACGTAGCGGACGACGAGGTCAAGTTGAATCTGTACCGGCGGCTGGCGCGGGCCGAGCAACCGTGCGAGATTCAAGCCGTGCGCGAGGAATTACGCGATCGCTTCGGGCCGCTGCCCGACGACGCGCAGCGACTCCTCCTCGTGGCCGAACTCCGCGCGCTCGGCGCCCGGGTGGGACTGGAAACGGTCCTGGTCAGGGGCGACGAGGCGCGGCTCACGTTTCGGCGGGACGCCCACCCCCGCCTGGCCGGCCTGACGGCGGCGCTCGATGCGGTGCAGTTCGAGGCCGAGGTGCGGCGGGCGCATCCACTCTCGCTGCGGCTCCGGCGGCTCGGGGGCGAGGCGATCGGCCCCGGGCTGGCGCGGGCGCTCACGGCGGTTCTGCAGGACTCTGACACCGAATAG
PROTEIN sequence
Length: 1100
MALDFLLDRFDDLPATRALAEGLPSPGSCLSLAGLPGSSAAVLVAALARRFPQRVFAVVAPTPTDAERWLADVQTLLAERAALYPQREGLGAEEPHFEIAGERVETLEALLAGRVRVLVTTARASAERTGVPAALEASRLVLSSGGGKRETGSVSLSGAVGRLSEMGYERVGMVIDVAQFSVRGGILDVYGFGMGAPARIEWWGDEIISLRTFDLDTQRSGGEIERVTILPVKTEGSGERGAGSGTRSSLLELLPTDTLVLVDQESAVAREVERAWSDAAHHLEVARRLGEEPPVREELLLAPDAWRAHMDRFARLAPGAGDAKARFPLTPPEAIDRDLKLLRRLVAGEPPTVILCDNEGQLERLEELLGAGRATLALGALDGGFVLPTLRVLTDHEIFRRARRLRRPRRYRSTSPSAAAAAGAEALTLGGYVVHLEHGIGIYRGLQTIAVGDGTLDVAVLEYEGGDRLNVPLYRLDQLEPYRAAGDGDAPPPRLHRLGATAWQRQRDRTRAAIRKMAGELLELYARRQLASGYAFPPDTPWQRELESAFLYEDTPDQRRAAAEVKRDLERPRPMDRLLVGDVGYGKTEVALRAAFKAVQAGKQVAVLVPTTILAEQHGRTFRERLADYPVRIEVLSRFRSAKASVAAVRQLAAGAIDIVIGTHRLLSRDVVFRDLGLLVVDEEHRFGVRHKERLKALKLSVDVLTLTATPIPRTLHLSLAGLRDLTLLETPPKDRSPVLTFIEPWDDALLEEALARELDRGGQVYFVHNRIETIATIAGRVRRLAPRARVAVAHGQLPEAELDAVMSRFVRGEVDILVSTMIVESGLDVANANTMVVDRADQLGLAQLYQLRGRVGRSHRRASCYLLVPDLVDAEAEERLRVLEHHTDLGAGYRIALRDLELRGAGNLLGAEQSGHAQAVGFDMYLRWLEDEVRVLKGERRPGSGEQWSPPDVTLDRPAHLPEEYVADDEVKLNLYRRLARAEQPCEIQAVREELRDRFGPLPDDAQRLLLVAELRALGARVGLETVLVRGDEARLTFRRDAHPRLAGLTAALDAVQFEAEVRRAHPLSLRLRRLGGEAIGPGLARALTAVLQDSDTE*