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13_1_40cm_4_scaffold_8956_12

Organism: 13_1_40CM_4_Gemmatimonadetes_69_8

megabin RP 53 / 55 MC: 25 BSCG 48 / 51 MC: 24 ASCG 12 / 38 MC: 9
Location: 13632..14369

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1ARS3_PELPD id=5224960 bin=16ft_combo_ws3_JS1 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 40.0
  • Coverage: 255.0
  • Bit_score: 160
  • Evalue 2.40e-36
atoC6; sigma-54 dependent DNA-binding response regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 65.2
  • Coverage: 247.0
  • Bit_score: 296
  • Evalue 3.00e-77
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 245.0
  • Bit_score: 218
  • Evalue 2.70e-54

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 738
GTGTCCCGGCTGAGCGTAATCGCAATCTCCGAAGCGTTCAAAGAATTCTGGAATGATCTCGCCCTGGATCTCGGTGTCGCCATCGACGTCCTCGGCCCGGCGGAAGCCCTTACCCCCTCTCCCCTCCCCAAACCTGAGACGGTCGCCGTCATCCTGGCAGCGGGCGGCGCGGAGCGGGACGCGATCCAGTGGCTCGAGAGCCACAGGGTCCCGCAGGGACTGCCGGTGCTGGTTGTGGGGACGGATCCCGGGCGACGCACGGCCATGCAGGTCGTGGCCCGCGGTGCGAGCGACTACTTCGCGCTGCCGGCCGATCTCGAGATCTTCCGCAATGCGGTCGCGGCCGCACTCACCGGCGCAGGGGCGCGCGAGGCGGCCGCGGCGGGCGGTCCTGAGGAGGCGTTCGGCGGTATCGTGGGCGAAAGCCCGGCTCTCAAGAAGGATCTGGCCCGGGCGGCCCGACTCCTGCCCCACCGCAACGCGCACGCCCTGATCGTCGGCGAGACGGGGACCGGGAAGGAGCTCCTCGCGCGGGCGATCCACGCCGGCGGACCACGCCGCGGCGCCCCGTTCGTGGCCGTCAACTGCTCGGCCCTCCCGGAAAACCTCATCGAGTCGGAGTTGTTCGGTCACGAGCGAGGCTCGTTCACGGACGCCCATGCGGCCAAGCCGGGGCTGTTCGAGGTGGCGGACACCGGCACGCTCTTCTTGGACGAGATCGGCGACCTGCCCCTCAGT
PROTEIN sequence
Length: 246
VSRLSVIAISEAFKEFWNDLALDLGVAIDVLGPAEALTPSPLPKPETVAVILAAGGAERDAIQWLESHRVPQGLPVLVVGTDPGRRTAMQVVARGASDYFALPADLEIFRNAVAAALTGAGAREAAAAGGPEEAFGGIVGESPALKKDLARAARLLPHRNAHALIVGETGTGKELLARAIHAGGPRRGAPFVAVNCSALPENLIESELFGHERGSFTDAHAAKPGLFEVADTGTLFLDEIGDLPLS