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13_1_40cm_4_scaffold_1007_20

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(17013..17780)

Top 3 Functional Annotations

Value Algorithm Source
3-hydroxyacyl-CoA dehydrogenase type II (EC:1.1.1.35) similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 255.0
  • Bit_score: 331
  • Evalue 1.70e-88
putative short chain dehydrogenase id=4478784 bin=GWF2_Methylomirabilis_70_14 species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 77.7
  • Coverage: 256.0
  • Bit_score: 389
  • Evalue 3.20e-105
hsd17b10, abad, camr, erab, hadh2, hcd2, hsd10, mhbd, mrpp2, mrx17, mrx31, mrxs10, schad, sdr5c1; hydroxysteroid (17-beta) dehydrogenase 10; K08683 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methyl similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 255.0
  • Bit_score: 389
  • Evalue 4.60e-105

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGGAGCTTCGGACCGTCAATGCAGTAGTGACCGGCGGCGCCTCCGGGCTCGGCCACGCCACCGCCGCTCGACTCCTCGCCGCCGGCGGCCGGGTGGCGCTGCTCGACCTCCCCACCTCGTCGGGCGCGGACGTGGCGAAAGCGCTGGGCCCGAACGCCCTCTTCACGCCGGCGGACGTCACCAGCGGCGCCGAGGTCGGCGCCGCGCTCGAAGCGCTCCGTGACCGGTTGGGCAGCCTCAACGTCCTCGTGAACTGCGCCGGCGTCGGCACGGCCATGAAGACCCTGGGCAAGTCCGGGCCTGCCCGGCTCGAAGACTTCACACGGGTGATCCAGGTCAATCTGATCGGGACGTTCAACTGCATCCGCCTGGCGGCGGCGATCATGGCGAAGAACGCGCCCACCCCCGACGGCGAGCGCGGCGTCGTCATCAACACCGCCTCCGTGGCCGCCTTCGACGGCCAGGTCGGCCAGGCCGCCTATTCGGCCTCGAAGGGAGGAATCGTCGGCCTGACCCTGCCGGTGGCGCGCGACCTCGCCGAGCTGGGCATTCGCGTGGTGACGATCGCGCCCGGCATCTTCGACACGCCCCTGCTGGCGACGCTGCCGGAGCCGGTCCGCGCCTCACTGGCCCGGCAGGTGCCGTTCCCGCAGCGGCTGGGCCAGCCCGACGAGTACGCGGCGCTGGCGCTTCACGTCATCGAGAACGTGATGCTGAACGGCGAGACGATCCGCCTCGACGGCGCGCTGCGCATGCAACCCCGCTGA
PROTEIN sequence
Length: 256
MELRTVNAVVTGGASGLGHATAARLLAAGGRVALLDLPTSSGADVAKALGPNALFTPADVTSGAEVGAALEALRDRLGSLNVLVNCAGVGTAMKTLGKSGPARLEDFTRVIQVNLIGTFNCIRLAAAIMAKNAPTPDGERGVVINTASVAAFDGQVGQAAYSASKGGIVGLTLPVARDLAELGIRVVTIAPGIFDTPLLATLPEPVRASLARQVPFPQRLGQPDEYAALALHVIENVMLNGETIRLDGALRMQPR*