ggKbase home page

13_1_40cm_4_scaffold_1716_2

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(531..1220)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase id=3955121 bin=GWA2_Methylomirabilis_73_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 227.0
  • Bit_score: 313
  • Evalue 2.00e-82
polysaccharide deacetylase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 227.0
  • Bit_score: 313
  • Evalue 2.80e-82
polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 220.0
  • Bit_score: 161
  • Evalue 3.60e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 690
GTGAGCCTGGCGCGCGTCGCGCTCGGCATCGCCGCCGGGGTCTGGGTCGGCTACGCCGGGGTGCCTCACCTACTCACCGCGGGCTGCGCCTGGCGCGGCTCGCCCGCCAAGCGCCGCATCGCGTTGACATTCGACGACGGCCCCGACGCCCGCTGGACGCCCCACATCCTCGAGATCTTGGAAGAGCGCGGCGTGCGCGGGACGTTCTTTCTGGTCGGCGGACGGGCCGCGCGCGCGCCCGACGTCGCCCGGGCCATCGCCGCCGCCGGGCACGAGATCGGCAATCACAGCTGGTCGCACCGGAGTCTGTGGTTCTGCAGCCCCGCCCAGACCGCCGCCGAGATCGGCCGCGCGCACAACTTCCTCGGCTATCTGATCGGCCGGGAGCCGCGCCACTTCCGCCCGCCCTGGGGGATGGTGAACGCGGCGATGTTCGGCGCGCTCCGGCGCTACGGTGAGCGCTGCGTCTTCTGGTCGATCCAGTCGGAGGGCCTGCGCCGTCAGCCGGCCCCGAGGCAGGCGCAGCACGTTCTCCGCCGCGCGCGGCCGGGCGCGATCGTCGACCTGCACGACGCCGAGGGCGTGGCCGGGGCGCCCGCCCGGCTCGGGCAGGCGCTGCCGTTGATGATCGACGGCCTCCGGGCCGCCGGCTACGACTTCGTGACGGTGGCCGAGCTCCTCGAAGGCTGA
PROTEIN sequence
Length: 230
VSLARVALGIAAGVWVGYAGVPHLLTAGCAWRGSPAKRRIALTFDDGPDARWTPHILEILEERGVRGTFFLVGGRAARAPDVARAIAAAGHEIGNHSWSHRSLWFCSPAQTAAEIGRAHNFLGYLIGREPRHFRPPWGMVNAAMFGALRRYGERCVFWSIQSEGLRRQPAPRQAQHVLRRARPGAIVDLHDAEGVAGAPARLGQALPLMIDGLRAAGYDFVTVAELLEG*