ggKbase home page

13_1_40cm_4_scaffold_2050_6

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(4585..5412)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0X2_NITHN similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 253.0
  • Bit_score: 244
  • Evalue 1.10e-61
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 253.0
  • Bit_score: 244
  • Evalue 3.00e-62
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADE14529.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitros similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 253.0
  • Bit_score: 244
  • Evalue 1.50e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosococcus halophilus → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGTCAAAACGACAGCTGGAGGGAGTGGTTGAAGCGGCGCCGCCTGGCGCGGCATTCGACGCCGCCGAACCGACTCTCATCGGAAAAGTGGTGCTCGTCACCGGGGCCTCGAGCGGCATCGGACGCGCGATCGCCGTTGCCTGCGCAGCCGCCGGGGCCGACGTGGCCCTGACCTACCGCGCGAACCGCGGCGGCGCCGATGAGACCGCCCAGCGCGTCCGCTCGCAGGGCCGTCGCGCCGAGCTGCTGCCCGTCGACCTCACCGAGCCGCGGGACCTCGAGGCCCTGGCCGCCCTGGTACGCGGGGCCCTGGGCCGGGTGGACGTGTGGGTGAACAACGCGGGCGCCGACATCCTGACTGGAGATGCGGCCCTGCTCACCTGGGTCGAGAAGCTGGACCGATTGCTCGCCGTGGACCTGCGCGGGACGGTGCTCGCCTCCTGGAAGGCGGTCGAACTGATGCGGGCCCAGCCGCCGGGCGGCGTGATCCTGAACCTGGCGTGGGACCACGTGCTCACCGGGGGGATGAAGGGCGGGTACACCGAGGTGTTCTGCGCCGCCAAAGGCGGGGTGTATTCGTTCAGCCGCGCGCTCGCTCACTCGGTGGCGCCCCACATCCGCGTGAACGTGCTCGGGCCCGGTTGGATCGAGACGGCGTACGGAGACCAGCTCGATCCCACGGTGAAGCAGCGCATCGCGCGGTCGATCCCGCTGGGTCGCTGGGGCACGCCTGAGGACATCGCGCACGCGGCGGTGTACCTCGCCTCCGACGCCGCGTCCTACGTCACCGGACAAATGCTGATGATCAACGGCGGGGCCGTCATCTAG
PROTEIN sequence
Length: 276
MSKRQLEGVVEAAPPGAAFDAAEPTLIGKVVLVTGASSGIGRAIAVACAAAGADVALTYRANRGGADETAQRVRSQGRRAELLPVDLTEPRDLEALAALVRGALGRVDVWVNNAGADILTGDAALLTWVEKLDRLLAVDLRGTVLASWKAVELMRAQPPGGVILNLAWDHVLTGGMKGGYTEVFCAAKGGVYSFSRALAHSVAPHIRVNVLGPGWIETAYGDQLDPTVKQRIARSIPLGRWGTPEDIAHAAVYLASDAASYVTGQMLMINGGAVI*