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13_1_40cm_4_scaffold_2588_3

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(1975..2640)

Top 3 Functional Annotations

Value Algorithm Source
h16_A2949; ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 220.0
  • Bit_score: 255
  • Evalue 6.80e-65
Glutathione ABC transport system substrate binding protein GsiB id=4621965 bin=GWA2_Methylomirabilis_73_35 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 143.0
  • Bit_score: 129
  • Evalue 4.00e-27
family 5 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 217.0
  • Bit_score: 85
  • Evalue 2.40e-14

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 666
GTGAGGCTGGCCGCGAGCCTGGCCGTCGATCGACGGGCCCTCAACGAGGCCGAGCTCCTCGGCTTCGCGGGATTGACCGGCAACGTGATCCCCAAGCACATGGAGTTCGCGCTGCCGATCGAACCCCACCCGTACGACCCCAAGCGGGCCAGGCAGCTCCTGGCCGAGGCCGGCTATGCGCGCGGATTCGACGCCGGCGACTTCACGATCCACCCGCCCTACCACTCCGTGGGCGAGGCGATCGGCAGCTACCTGGCGGCGGTCGGGATCCGGACGAAGATCCGCACGATGGAGCGGGCCGCCTTCTTCTCGGCGTGGGGCGACAAGAAGTTCAAGGGCCTGGTCTTCGGCGGCCTGGGGGCGGCCGGCAATGCCGCCACGCGGATCCAGAGCCTCGCCACCAGAAGCGGCCTCTATGCGGTAGGCGTCCTCCCGGAGGTGGATGATCTCTTCGAGCGTCAGGCTCGGGAGACGGACCGCCGGAAGCGCGAGGAGATGCTCCATCAGATCCAGCGGATCCTCCACGACCGCGTGGTGTTCGCCCCGATCTGGGAGAACGCGTTCATTCGCGGCGTGGGACCAAGGGTGGAGGAGCCGGCTCTGAACCTGATCCCCGCCTTCCCGTACTCCGCGCCGTACGAAGACCTGAGGCTCAAGCGACCATGA
PROTEIN sequence
Length: 222
VRLAASLAVDRRALNEAELLGFAGLTGNVIPKHMEFALPIEPHPYDPKRARQLLAEAGYARGFDAGDFTIHPPYHSVGEAIGSYLAAVGIRTKIRTMERAAFFSAWGDKKFKGLVFGGLGAAGNAATRIQSLATRSGLYAVGVLPEVDDLFERQARETDRRKREEMLHQIQRILHDRVVFAPIWENAFIRGVGPRVEEPALNLIPAFPYSAPYEDLRLKRP*