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13_1_40cm_4_scaffold_4167_5

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: 3915..4502

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 195.0
  • Bit_score: 255
  • Evalue 6.00e-65
Lipopolysaccharide transport periplasmic protein LptA id=4810649 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 218.0
  • Bit_score: 223
  • Evalue 1.80e-55
lipopolysaccharide transport periplasmic protein LptA similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 203.0
  • Bit_score: 112
  • Evalue 1.70e-22

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 588
GTGAGGAGGCGCGCGCTGATCGGGCTCGGGCTGCTCGCCGCCGCGCTGGGAGCCCCCGTGGCCGTGCCGGCGCAGACGGGGGCGGCCCCGCCGGCGGCGAGGCCGCCCACTCGCGGCGAGGACCGGAATCAGCCCGTGACCGTCGACGCGGACAGGATGGAGCGCTTCGGCAAGGAGAGCCTCGTCATCTTCATCGGGAACGTCGTGGCGCGCCAGAATAACTCCGTACAGTACGCCGACCGCATGGAAGTCTATCTCGACGAGAAGGGCGACCGGATCTTGCGCACCGTGTCGACCGGGAACGTGCGCATCGTCACCAAGGACTGCCGGACGGGTACGGCCAAGCGCGCAGAGTACTTCGACCTCGAGCAGCGCATGGTGTTGATCGGCAACGCCCGGGTCTGGCAAGAGGACAACGTGGTGAGCGGCGACACGATCACCATCTTCCTCTCCCAGGACCGCAGCATCGTCCAGGGGGGACGCCAGGAGCGGGTCAAGGCGGTCTTCTACCAGAAGGACCAGGCCAAGCCGGCGGACTCGACGGCGACTGCGGCGACCTCGAAACCCCAGTCGGGTTGCGAGAACTGA
PROTEIN sequence
Length: 196
VRRRALIGLGLLAAALGAPVAVPAQTGAAPPAARPPTRGEDRNQPVTVDADRMERFGKESLVIFIGNVVARQNNSVQYADRMEVYLDEKGDRILRTVSTGNVRIVTKDCRTGTAKRAEYFDLEQRMVLIGNARVWQEDNVVSGDTITIFLSQDRSIVQGGRQERVKAVFYQKDQAKPADSTATAATSKPQSGCEN*