ggKbase home page

13_1_40cm_4_scaffold_5969_1

Organism: 13_1_40CM_4_Rokubacteria_69_5

near complete RP 45 / 55 MC: 3 BSCG 41 / 51 ASCG 13 / 38
Location: comp(3..287)

Top 3 Functional Annotations

Value Algorithm Source
oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 68.0
  • Bit_score: 100
  • Evalue 1.60e-18
Oligopeptide ABC transporter, permease protein id=2476250 bin=GWA2_Methylomirabilis_73_35 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 68.0
  • Bit_score: 97
  • Evalue 9.50e-18
oligopeptide ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 85.0
  • Bit_score: 65
  • Evalue 8.60e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 285
TTGAACGGCTCCCTGGGGGCGGGCTTGGAGGTCGTCACGGTCGCCGCGCCGGCCGAGCACCCGGCGGCGCGCGCGTGGCGCCTGCCGCGCAACCGTAGCGTCTGGATCGGCGCCGCGGTGCTCCTGGTCATCGTGGCGATCGCCGTCTTGGCGCCCGCGTTGGGGACCAGCAACCCCGCGGAGATCGAACCGACCGCGCGCAACCGTCGCCCCGGCGCCCAGCGCGTCATTCGCCACGACGACGGCAGCAAGACGGTCACGACCTACCGGATGGGCACCGACAGC
PROTEIN sequence
Length: 95
LNGSLGAGLEVVTVAAPAEHPAARAWRLPRNRSVWIGAAVLLVIVAIAVLAPALGTSNPAEIEPTARNRRPGAQRVIRHDDGSKTVTTYRMGTDS