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13_1_20cm_full_scaffold_887_2

Organism: 13_1_20CM_Gemmatimonadetes_69_28

partial RP 8 / 55 BSCG 9 / 51 ASCG 4 / 38
Location: 443..2227

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 601.0
  • Bit_score: 639
  • Evalue 4.50e-180
Lipid A export ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A621_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 583.0
  • Bit_score: 491
  • Evalue 1.10e-135
  • rbh
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 597.0
  • Bit_score: 541
  • Evalue 2.60e-151

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1785
ATGGGCCGCAGCGCCCGCGTGCTCGGCCTGCTCCGCCCCTACACGCTCCTCTTCGCCGTCAACATCGTCGCCACCGTGCTGTCGTCCCTCATGGACGGGGCGACGTTCGTGCTGCTGATCCCCTTCCTCCGCGCCTTGTTCAAGCTGCAGGCGTTGCCGCCGACCGGCTCCTCCGCGGTGGAGGAGGTGCTCGGCCGGATCGCCGGGCCGCTGCTCACGGTGGGCGCACCCGAAGTGGCGCTGCGCAACGTGGTCCTGGTGCTGTTGATCGCCCTCGTGATCAAGAACGCCGCGGCGTACGGCGCGGTGATGAGCAGCGTGGCGATCGAGGAGGGTGTGGTGCGCGACCTGCGCGTGCGCCTGTTCCGTCACCTCCAGACGCTGCCGCTCGGCTTCTTCCAGCGCACCAAGGGCGGCCAGCTCCTCGCCCGCATCATCAGCGACACCGATCAGGTCAAGACGGCCGTCACGGCGGCGCTCGCGTCGTTCCTCCGCAACGTCAGCCTGATCCTCGTCTACCTCGCGATCCTGGTCGGACTCTCCTGGCGGCTCACGATCGTCGCCCTCGTGCTCGCGCCGGTCCTAGTGCTCATCATCCGGCCGATCGTGGCACGAGTGCGGCGCCGCTCGCGCGAGCAAGCGGACGACCGTGGTGAGCTCACGAGCCTAGTCAGCGAGATGGTGGCGTCGGTCAGGCTGGTGCGCGCGTACGTCGCCGAGGCGTTCGAGGTCGAGCGGTTCCAGCGGCTGGCCGACCGGTACCGCAAGCGCGTGCTGCGAGCGCAGGGCGCCTCGACGCTGACCAGCCCCGTGAGTGAAATGTTCGCCGGAGTCGTGATCGTGCTGATCATCTGGTGGGGCTTGAAACTCGCCCTCCGGCCCGAGCTGTTCATCGCGTTCGTGGCTTTAGCCTTGCGGCTCATGTCTCCGGTAAAGGCCGTCGTGCAGTACCCCGCGATCATGGCCGGCGCGGTCGCCGCGGCCGACCGCTGCTTCGAGGTGCTCGACGTCCCGGCGGACGAGGGCGACCGGCCGGGCGAGACGCCGGCCAGCTTCGGCGACCGCATCGAATATCGCGGCGTGACGTTCTCCTACGACGGCGAGGCTCCCGTGCTGCGCGACGTGGACCTCGAAGTGCGGCGCGGTCAGGTCGTCGCCATCGTGGGGCCGTCGGGGGCGGGGAAGACCACCCTCGTGGATCTGTTGCCGCGGTTCTACGAGCCGACGGGCGGCCAGATCCTCATGGACGGCGTGCCGGTCACCCGCTTCACGCGGCGCAGTCTGCGCGCGCTGATGGGGATCGTGTCGCAGGAGACCGTGCTGCTCAACGACACGGTGTACGCGAACATCGCCTACGGCCGTGGGGACTTCTCGCTCGCGCAGGTGCGCGCCGCCGCCCAGGCCGCGAACGCGGACGAGTTCATCGCCCAGCTTCCGAAGGCTTACGACACGCTGTTGGGCGAGCGGGGCACGCGGCTCTCCGGCGGGCAGCGCCAGCGCATCGCGATCGCGCGGGCCCTGCTGCGCGACCCGCCGGTCCTGATCCTCGACGAGGCGACCAGCGCCCTCGACACCGAGTCGGAGCGCCTGGTGCAGGAGGCGATCGATCGCCTCATGGCGCATCGTACGGTGCTCGTGATCGCGCACCGCCTGGCGACCGTGCGACACGCGGACCTGATCGTCGTACTCGCGGATGGCCGGCTGGTGGAGCGCGGGACGCACGACGCGCTGTTTGCGGCCGGCGGACTGTACCGCCGCCTCTACGACATGCAGTTTCGTGCCTGA
PROTEIN sequence
Length: 595
MGRSARVLGLLRPYTLLFAVNIVATVLSSLMDGATFVLLIPFLRALFKLQALPPTGSSAVEEVLGRIAGPLLTVGAPEVALRNVVLVLLIALVIKNAAAYGAVMSSVAIEEGVVRDLRVRLFRHLQTLPLGFFQRTKGGQLLARIISDTDQVKTAVTAALASFLRNVSLILVYLAILVGLSWRLTIVALVLAPVLVLIIRPIVARVRRRSREQADDRGELTSLVSEMVASVRLVRAYVAEAFEVERFQRLADRYRKRVLRAQGASTLTSPVSEMFAGVVIVLIIWWGLKLALRPELFIAFVALALRLMSPVKAVVQYPAIMAGAVAAADRCFEVLDVPADEGDRPGETPASFGDRIEYRGVTFSYDGEAPVLRDVDLEVRRGQVVAIVGPSGAGKTTLVDLLPRFYEPTGGQILMDGVPVTRFTRRSLRALMGIVSQETVLLNDTVYANIAYGRGDFSLAQVRAAAQAANADEFIAQLPKAYDTLLGERGTRLSGGQRQRIAIARALLRDPPVLILDEATSALDTESERLVQEAIDRLMAHRTVLVIAHRLATVRHADLIVVLADGRLVERGTHDALFAAGGLYRRLYDMQFRA*