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13_1_20cm_full_scaffold_50073_4

Organism: 13_1_20CM_Chloroflexi_66_33

partial RP 21 / 55 BSCG 12 / 51 ASCG 2 / 38
Location: comp(1496..2059)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9K2_CALAS similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 180.0
  • Bit_score: 140
  • Evalue 1.90e-30
ECF subfamily RNA polymerase, sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Chloroflexi_60_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 176.0
  • Bit_score: 152
  • Evalue 6.90e-34
putative RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 180.0
  • Bit_score: 140
  • Evalue 5.40e-31

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Taxonomy

RBG_13_Chloroflexi_60_13_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 564
TTGACGACGTCCGACGACGCTCTCATCCGCCGCGCCCAGGCTCTCGACCCGGGAGCACTGGCCGAGCTCTATGACAGGCATTTCGATGGGATATACCGATATCTATTCACCAGACTGCGCCACCAAGCCGACGCTGAAGACTTCACCGAGCAGGTCTTTCTGAAGATGGTCGATTCCATTCAGCGCTACCGGCCGCGCGGGGTCGCGTTTTCCTCCTGGCTCTACCGCATCGCCCACAACCTGCTCGTCGATCGCTATCGGCGCGCCGGGCGTGAGGCCGTGGAACTTACCGAGCAGGTCCAGGACGGTCGCCCACATGCCGATCCCGCCACGCTGGCGCAGAACTCCGAGGACCGCCGCCTCCTGATCGAGGCGATGCGCCGGCTCACGCCCGAGCAGCAGCAGGTGATCACGATGCGGTTCATCGACAACCTCAGTGTCGACGAGATCGCCCACCTGACCCGCCGCCGGCCCGGCGCCATTCACTCGATGCAGCACCGGGCACTCGCGAGCCTCAATCGGTTTCTGCTGGAACGCGAGCAGGTGGAGGCGCGCCGTGCCTGA
PROTEIN sequence
Length: 188
LTTSDDALIRRAQALDPGALAELYDRHFDGIYRYLFTRLRHQADAEDFTEQVFLKMVDSIQRYRPRGVAFSSWLYRIAHNLLVDRYRRAGREAVELTEQVQDGRPHADPATLAQNSEDRRLLIEAMRRLTPEQQQVITMRFIDNLSVDEIAHLTRRRPGAIHSMQHRALASLNRFLLEREQVEARRA*