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13_1_20cm_full_scaffold_961_8

Organism: 13_1_20CM_Chloroflexi_66_33

partial RP 21 / 55 BSCG 12 / 51 ASCG 2 / 38
Location: 7384..8034

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Atopobium sp. oral taxon 199 str. F0494 RepID=S3APM1_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 214.0
  • Bit_score: 217
  • Evalue 1.40e-53
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1203602 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. oral ta similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 216.0
  • Bit_score: 217
  • Evalue 1.50e-53
sigma-B/F/G subfamily RNA polymerase sigma-28 factor similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 216.0
  • Bit_score: 212
  • Evalue 1.30e-52

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Taxonomy

Atopobium sp. oral taxon 199 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 651
GTGGTCTTCCTGGCCAAGAAATTCAGCAACCGGGGCGAGCCGCTGGAGGATATCGTCCAGGTCGGCTATATCGGACTGCTGCAAGCGATCGAGCGCTTCGAGCCGCAGCGGGGCCTGGAGTTTTCGACGTTCGCCACGCCCACCATCGTGGGGGAGATCAAGCGGTATTTCCGGGACAAGAGCTGGGCGGTGAAGGTGCCGCGCCGGCTGCAGGAGACGATGCAGCGCGCCGATGTGGCGCAGCAGCGACTGCAAGCGACGCTCGGCCGACAGCCGTCGGTCAACGAAATCGCCAAGGAGCTCGGGCTGGAACCCGAAGAGGTGCTGGCCGCGATGGAGGCGAGCCCCGCCCAGCGCACCATCCCCTTCGAGTCAACCGGTTCCGCCGCCCGCGACGACGACGGCCTGCAACTGACCGAGCGACTGGGGCTGGAAGACGAGAACCTCGACAAGGTGGAACTGCAGGATCTCCTCGACCAGGCGATGCGCCACCTGACGCCGCGTGAGCGGCGGATCATGTATCTCCGCTTCGTCGACGAGCTGCCCCAAGCGGAGGTTGCCAAGCGGCTCGGCATCTCACAGATGCATGTCTCGCGGCTGCAGCGGGCGGCGGTCGAGCGGCTGAAGCGCGAACTACCAGTGTCCTCGTAA
PROTEIN sequence
Length: 217
VVFLAKKFSNRGEPLEDIVQVGYIGLLQAIERFEPQRGLEFSTFATPTIVGEIKRYFRDKSWAVKVPRRLQETMQRADVAQQRLQATLGRQPSVNEIAKELGLEPEEVLAAMEASPAQRTIPFESTGSAARDDDGLQLTERLGLEDENLDKVELQDLLDQAMRHLTPRERRIMYLRFVDELPQAEVAKRLGISQMHVSRLQRAAVERLKRELPVSS*