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13_1_20cm_3_scaffold_10274_14

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(7955..8512)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KWQ6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 66.3
  • Coverage: 178.0
  • Bit_score: 224
  • Evalue 7.70e-56
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65099.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 183.0
  • Bit_score: 225
  • Evalue 4.80e-56
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 184.0
  • Bit_score: 218
  • Evalue 1.60e-54

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Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCGTACCACCACGGCGATCTCCGGCGCGCCCTGCTGGCGGCGGCGATCGAGGCGATCGGCGAGCACGGACCGGCCGCGGTGAGCCTGCGCGACCTGGCCCGCCGGGCCGACGTCTCGCACGCCGCGCCGGCGCACCACTTCGGCGACAAGGCCGGACTGCTGACCGCGGTCGCGATCGAGGGGTTCACGCTGCTCGCCCGGACCCTCCGGGAGACCGGCGAGCGGACCGGCAGCTTCCTGGAGATCGGTGTGGCCTACGTCGGGTTCGCCGTGGACCACCCGGCCCACTTCGCCGTCATGTACCGGCCGGACCTCTACCACGCCGACGATCCGGCGATCCTCGACGCCCGCGCGGCCGCCCGTGCCGCGCTGCGCGGCGGCCTGGCCATGCTCGGTCAGCGCGGCAACACCGGCGACCCGGCCGTCGCCGCCCTCGCGGCCTGGTCGACCATGCACGGGCTGGCCACCCTATGGCTGTCCGGCAGCCTGCCCGACCCGCCCGGCGACGATCCCCGCGCGGTGGCACGCGCCATCGGTCTGGTGCTCTTCCCCTAG
PROTEIN sequence
Length: 186
MAYHHGDLRRALLAAAIEAIGEHGPAAVSLRDLARRADVSHAAPAHHFGDKAGLLTAVAIEGFTLLARTLRETGERTGSFLEIGVAYVGFAVDHPAHFAVMYRPDLYHADDPAILDARAAARAALRGGLAMLGQRGNTGDPAVAALAAWSTMHGLATLWLSGSLPDPPGDDPRAVARAIGLVLFP*