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13_1_20cm_3_scaffold_10488_7

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(5217..5834)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036DC4A0 similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 191.0
  • Bit_score: 225
  • Evalue 6.50e-56
RNA polymerase sigma factor {ECO:0000313|EMBL:KDN20386.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;" UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 183.0
  • Bit_score: 187
  • Evalue 2.10e-44
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 183.0
  • Bit_score: 186
  • Evalue 5.50e-45

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Taxonomy

Amycolatopsis rifamycinica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGATGACGAGGATGCCCACGGACGGGGCACCGCCGGTCGAGGCGGTGCCCGCCGACCGCCCGGCCCGGCTGGCGCGCTGCCTCGACCGGGCCCGGCAGGGGCAGCTGGGTGCGCTCGACGAGGTGGTGCGCGAGCTGAACCCGTTGCTGTGGCGGGTCGCCCGGTCCCAGGGCCTGTCCGTCGACGACGCCGTCGACGTCGTACAGACGACCTGGCTGGAGCTGCTGCGGCGGTTGCACGAGATCCGGTCGCCCGAGGCGCTGACCGCCTGGCTGGTCGCCACCACCCGGCGCGGCGCCTGGCACGCCCGCACCAAGGTGCGCAAGCATCCGGGCCAGGACCCGGAGGTACTGGACGAGCTGCCGGATCCGGCCGCCGACCCGAGCGAGCGGCTGCTCACCGACGAGCGCGACCGGGCCCTGATGCGGCACCTGCACCGGCTACCCGAGCGGTGCCGCGCGTTGCTGCGCATCGTCGCCTTCGTCGACCGCCCGGATTACTCGGTAGTGGCGGAGGCGCTGGACATGCCGCGCGGCTCGATCGGGCCGACCCGTGGCCGGTGCCTGGCCAAGCTCCGGGAGATGCTGCTGGCGGACCCGAACTGGAGTGCGCGATGA
PROTEIN sequence
Length: 206
MMTRMPTDGAPPVEAVPADRPARLARCLDRARQGQLGALDEVVRELNPLLWRVARSQGLSVDDAVDVVQTTWLELLRRLHEIRSPEALTAWLVATTRRGAWHARTKVRKHPGQDPEVLDELPDPAADPSERLLTDERDRALMRHLHRLPERCRALLRIVAFVDRPDYSVVAEALDMPRGSIGPTRGRCLAKLREMLLADPNWSAR*