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13_1_20cm_3_scaffold_1143_3

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 1328..2047

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Salinispora pacifica RepID=UPI0003658583 similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 268.0
  • Bit_score: 271
  • Evalue 9.20e-70
Regulatory protein, LuxR {ECO:0000313|EMBL:ABP56269.1}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC B UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 268.0
  • Bit_score: 269
  • Evalue 4.90e-69
regulatory protein LuxR similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 268.0
  • Bit_score: 269
  • Evalue 9.90e-70

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Taxonomy

Salinispora tropica → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 720
GTGCGTACGGTCCTGGTGTGCGTCCGGACCCCGGTCGCGGCACAGACGATCGCGGTGTGCGCCAACCGGCTCGGGGTCGCCTCCGCGGTACGTACCGCGGTCAGCGGGGTCGAGGTGCTGGCCCGCCTGGCGGAGCGACCGGCCGACGTGGTCCTGGTCGACTCCGCGCTGACCCGGCCCGACCCGGTCGCCTTCGTCCGCCGCGCCCTCGGGTACGCCCCCGGCGCGACCCTGGTGCTGTTCGGCAACGAGGACGGTCAGGTGGCCGCCGCGGCGGTCGCCGCCGGAGCGCGGGGGATGATCCGCGGCGGCGACACCGACCTGGTCACCTCGGTGACGAAGACGCTGCTGTTGCTGTGCCTGCCGCCGCGCGGGGCCCTCACGCCGGCCGGGGCGACCGGCCCCAACCATGGCGCGGTACCGGCGCCGGCCGGCCCGGCCGCGGTGGCCGCGGCGGTCGCCGTCGAGTCCGCTCCGCTGCTGGTACCGGCGCAGCGGGAGAGCGAGCCCGGGGTACCCCGCCGCCCCGCCCTGACCGAGCGCGAACTGCAGGTGCTCAACGGGATGGCCGAGGGCAAGAGCAACGCGGAGATCGGCCGGGACCTGTTCGTCTCCGAGGACACCGTCAAGACACACGCCCGGCGGCTGTTCCGCAAGCTGGGCGCCCGCGACCGGGCACACGCGGTCGCCTCCGGCTTCCGCGCCGGGCTGGTCAGCTGA
PROTEIN sequence
Length: 240
VRTVLVCVRTPVAAQTIAVCANRLGVASAVRTAVSGVEVLARLAERPADVVLVDSALTRPDPVAFVRRALGYAPGATLVLFGNEDGQVAAAAVAAGARGMIRGGDTDLVTSVTKTLLLLCLPPRGALTPAGATGPNHGAVPAPAGPAAVAAAVAVESAPLLVPAQRESEPGVPRRPALTERELQVLNGMAEGKSNAEIGRDLFVSEDTVKTHARRLFRKLGARDRAHAVASGFRAGLVS*