ggKbase home page

13_1_20cm_3_scaffold_1164_19

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 25992..26243

Top 3 Functional Annotations

Value Algorithm Source
Putative IS630 family transposase n=2 Tax=Frankia sp. (strain CcI3) RepID=Q2J5I2_FRASC similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 83.0
  • Bit_score: 117
  • Evalue 7.80e-24
Putative IS630 family transposase {ECO:0000313|EMBL:ABD13460.1}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;" UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 83.0
  • Bit_score: 117
  • Evalue 1.10e-23
IS630 family transposase similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 83.0
  • Bit_score: 117
  • Evalue 2.20e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. CcI3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 252
ATGCGGAAGTTCCTCGACGCGAGCCGGCAGTGGCTGACCGTGGTGCGGCTGCCCGCCTACGCCCCGGACCTCAACCCGGTCGAGGGCGTATGGGCGCACATGAAACATGGCCTGGGCAACCTCGCCGCCTGCGGCCTCGATCAACTCACCGCCACCGTGAAACGACGTCTCAAGCAGATCCAATACCGCCCAGACCTCATCGACGGATTCCTCGCCCAGACCGGCCTGAGCGTCCAACCGCAACCGCCGTAA
PROTEIN sequence
Length: 84
MRKFLDASRQWLTVVRLPAYAPDLNPVEGVWAHMKHGLGNLAACGLDQLTATVKRRLKQIQYRPDLIDGFLAQTGLSVQPQPP*