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13_1_20cm_3_scaffold_12032_17

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(7305..7961)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VU84_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 214.0
  • Bit_score: 344
  • Evalue 6.00e-92
  • rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 214.0
  • Bit_score: 344
  • Evalue 8.40e-92
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 214.0
  • Bit_score: 344
  • Evalue 1.70e-92

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Taxonomy

Actinoplanes friuliensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 657
GTGGCCGCCGAACTGACCGCTGACGTCCACTCGGCCGCGGGCGAGACGGTACGCACCGTCGAGCTGCCCGACGACGTCTTCAACGTGCAGGCCAACATCCCGCTGATGCACCAGGTCGTGGTGGCCCAGTTGGCGGCCGCCCGGCAGGGCACCCACAAGGCCAAGAGCCGTGGCGAGGTGTCCGGCGGCGGCCGGAAGCCGTACAAGCAGAAGGGCACCGGCCGGGCCCGGCAGGGCTCGATCCGCGCGCCGCAGTTCACCGGCGGTGGCGTCGTGCACGGGCCGGTCCCGCGCGACTACAGCCAGCGGACCCCGAAGAAGATGAAGGCCGCCGCGCTGCGCGGTGCCCTCTCGGACCGGGCCCGCGAGGGCCGGATCCACGTGGTCGAGTCCTTTGTGGACGGTGACACGCCGTCGACCAAGGCCGCGCTGGCCGCCCTGGCCGCGGTGACGCGGTCGGAGAAGGTCCTGGTCGTACTGACCCCGACCGACGAGCTGAACTGGATGTCGCTGCGCAACCTCCCGACCGTGCACCTGCTGGAGGCGGGCCAGCTCAACACGTACGACGTGCTGGTCGCCGACGAGGTGGTCTTCACCGCCGAGGCGCTGGACGAGTTCCTGGGCGTACCGGCCGCTGCCGAGGAGGCCGACAAGTGA
PROTEIN sequence
Length: 219
VAAELTADVHSAAGETVRTVELPDDVFNVQANIPLMHQVVVAQLAAARQGTHKAKSRGEVSGGGRKPYKQKGTGRARQGSIRAPQFTGGGVVHGPVPRDYSQRTPKKMKAAALRGALSDRAREGRIHVVESFVDGDTPSTKAALAALAAVTRSEKVLVVLTPTDELNWMSLRNLPTVHLLEAGQLNTYDVLVADEVVFTAEALDEFLGVPAAAEEADK*