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13_1_20cm_3_scaffold_1489_8

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(8373..8948)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000381B20B similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 188.0
  • Bit_score: 243
  • Evalue 1.70e-61
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:CCH34002.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espan UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 177.0
  • Bit_score: 205
  • Evalue 5.30e-50
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 177.0
  • Bit_score: 205
  • Evalue 1.10e-50

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Taxonomy

Saccharothrix espanaensis → Saccharothrix → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGACCGGGCCAGAGGCCGAACTCGTCGACCGCGCCGTCCGGGGTGATCCGGACGCCACAGCGGCGTTGCTGACCCTGGTCAGGCCGGGTGTCGTCCGGTACTGCCGGGCCCATCTGGGCCGGGTCGGCGGCCGGTACACCACGGCCGACGACGTGAGCCAGGAGGTCTGTCTCGCGGTGCTGCGCTCGCTGCCCCGCTACCGGGACCAGGGCCGGCCGTTCGCCGCGTTCGTCTACGGGATCGCCGCCCACAAGATCGCGGACGCCCAGCGCGCGGCGGTACGGCATCTCGCGGTCACCCCGGTCGACGTGATCCTCGACCAGGCGGACAGCGCACCGGGTCCGGAGCAGCGCGCGATCGAGACCGACCAGGCCCGCCGGCTCTCCGAGCTGCTGCGCCAGCTCTCTGAGGTACACCGGGAGATCCTGGTGCTCCGGGTGGCCGTCGGGCTGTCGGCCGAGGAGGTCGCCGGGGCCCTCGGGATGACGGCGGGTGCCGTCCGGGTGGCCCAGTCCCGCGCGCTGGCCCGGCTGCGTACCCTGGCCCCGACCGCATTCAACGAGGTGCCGGCATGA
PROTEIN sequence
Length: 192
MTGPEAELVDRAVRGDPDATAALLTLVRPGVVRYCRAHLGRVGGRYTTADDVSQEVCLAVLRSLPRYRDQGRPFAAFVYGIAAHKIADAQRAAVRHLAVTPVDVILDQADSAPGPEQRAIETDQARRLSELLRQLSEVHREILVLRVAVGLSAEEVAGALGMTAGAVRVAQSRALARLRTLAPTAFNEVPA*