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13_1_20cm_3_scaffold_153_28

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 26537..27403

Top 3 Functional Annotations

Value Algorithm Source
Permease component of ABC-type spermidine/putrescine transport system n=3 Tax=Amycolatopsis mediterranei RepID=D8HKN3_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 270.0
  • Bit_score: 384
  • Evalue 9.00e-104
  • rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:AEK47668.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatop UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 270.0
  • Bit_score: 384
  • Evalue 1.30e-103
spermidine/putrescine ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 270.0
  • Bit_score: 384
  • Evalue 2.50e-104

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGAGCGAGGACATCAACATCGTGGCTCCGGCCCGGCGCCGGATCATGGCCCGGCCGGTGGTCTGGGTGATCTGGGCCGTGCTGGCGTTCTTCTTCGTCAACCTGGCCGGGGTGGTCTTCTCGGTCGTGGTGGACTCGTTCTCGACCCAGTGGTTCGGCACCTGGTGGCCGGCGGGCCTGACCGTCGAGTACTGGCAGAGCGCGTGGCACGACTTCGACATCGGCAGCGTACTGATCGTCACGCTCCAGGTGTCGCTGTCGGTCGTGGTCGTCTCGGCACTGGTCGGGGTACCGGCGGCGTACGTGTTGGCCCGCCGGCAGTTCCCGTTCAAGCGGCTGGTGATGCTGGTCTTCCTGCTGCCGGTGATGGTGCCGCCGATCGCGTACGGCATCCCGCTGGCGACCGTGCTGTACACGTACCACATGGCCAACTCGCTGACCGGCGTGATCCTGGTCAACCTGGTACCGGCGATCCCGTTCGTGATCCTGACGATGACCCCGTTCATCGAGCAGATCGACCCGAAGGTCGAGGCGGCCGCCCGGATGTGCGGTGCCCGCACCTGGCAGGTCTTCGCGCGGGTCCTGGCACCGCTGCTGATCCCCGGGATCCTCGCGGCGTCGGTGCTCGTCCTGGTCCGTACGGTCGGCATGTTCGAACTGACCTACCTGGTCGCCGGTACCGACAGCCAGACCCTGGTGGTCAAGCTGTTCAACTCGATGAACGCGGCCGGGATCCGGCCGCCGCAACAGACCGACTCGATGGCGGTCATCTACATGGGCACGATGCTGGTACTGCTCATCATCGCGCTGCGCTTCGTCAACCCGACCCAGCTCGTCACCCGGGTCGCGGAGGACCGCGAGAAGTGA
PROTEIN sequence
Length: 289
MSEDINIVAPARRRIMARPVVWVIWAVLAFFFVNLAGVVFSVVVDSFSTQWFGTWWPAGLTVEYWQSAWHDFDIGSVLIVTLQVSLSVVVVSALVGVPAAYVLARRQFPFKRLVMLVFLLPVMVPPIAYGIPLATVLYTYHMANSLTGVILVNLVPAIPFVILTMTPFIEQIDPKVEAAARMCGARTWQVFARVLAPLLIPGILAASVLVLVRTVGMFELTYLVAGTDSQTLVVKLFNSMNAAGIRPPQQTDSMAVIYMGTMLVLLIIALRFVNPTQLVTRVAEDREK*