ggKbase home page

13_1_20cm_3_scaffold_1676_12

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 8409..9380

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SF08_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 306.0
  • Bit_score: 399
  • Evalue 2.30e-108
  • rbh
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ABL80393.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Noc UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 306.0
  • Bit_score: 399
  • Evalue 3.30e-108
binding-protein-dependent transport system inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 306.0
  • Bit_score: 399
  • Evalue 6.60e-109
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nocardioides sp. JS614 → Nocardioides → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 972
GTGACCCTCCAGGTCGAACGGCCGGCGCCGGCGCCCCCTCCCGCCAGGGGTACCGGTCGCCGGCTTCTGGCGCCGCTGCGTGGCGGTGCCGGGCGCCAGGCGCGGCTGGCGGCGGTCCTGCTGCTGCCAGCCGCCCTGGTGGTCTTCGGCGTGGTGCTGTACCCGGCCGGTCGTGCCCTGGTCATCTCCTTCTACGACGTCACCAGCCCGTTCCCCGGCGCGTACCCGTTCCGCGGCCTGGCCAACTACGTCGACATCCTGCGCGACCACCGCACCTGGGTCGCGGTCCAGCACACCGCCTACTTCACCGTGGTGTCCACGGTCTTCGAGCTGCTGCTCGGCATCGGGGTCGCGCTGCTGCTCGCCGCGCCGCTGCGGTTCCGGTGGCTGTTCCGGTCGGTGGTGATCGTGCCCTGGGCGCTGCCCACGATCGTCAACGGCGCGATGTGGAAGTGGCTGCTCAACGCCGAGTTCGGCGTGGTCAACTCGGTGCTCTACCAGCTCGGCCTGCAGGACCAGTACCGGTCCTGGCTGGGTACCGACCCGTTCCTCGCGCTCAACATGGTGGTGCTGGCGGACGTCTGGAAGAACACCTCGCTGGTCGCGTTCTTCCTGCTCGCCGGGTTGCAGACGATCCCGCGCGACCTCTACGAGGCGGCCCGCGTGGACGGGGCAGGGCCGGTCCGGTCGTTCTTCCGGATCACGCTGCCGCTGCTGGTACCGACCATCGCGATCGTGCTCGTGCTGCGCACCATCGACGCGTTCCGGGTCTTCGACATCATCTACGTGATGACCGGGGGCGGGCCGGCCAACGGTACCCAGACGATCACCTTCCTCACCTACCTGCAGGCGTTCTCGGCGCAGCGGTTCAGCGTCGGTGCGTCCCTGGCCTACCTGACCGTCCTGGCCATCCTCGCGCTGGCGATGGTCTACCTGCGGCTGTTGCGGCAGAACGAGATGAGGGCGCTATGA
PROTEIN sequence
Length: 324
VTLQVERPAPAPPPARGTGRRLLAPLRGGAGRQARLAAVLLLPAALVVFGVVLYPAGRALVISFYDVTSPFPGAYPFRGLANYVDILRDHRTWVAVQHTAYFTVVSTVFELLLGIGVALLLAAPLRFRWLFRSVVIVPWALPTIVNGAMWKWLLNAEFGVVNSVLYQLGLQDQYRSWLGTDPFLALNMVVLADVWKNTSLVAFFLLAGLQTIPRDLYEAARVDGAGPVRSFFRITLPLLVPTIAIVLVLRTIDAFRVFDIIYVMTGGGPANGTQTITFLTYLQAFSAQRFSVGASLAYLTVLAILALAMVYLRLLRQNEMRAL*