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13_1_20cm_3_scaffold_17026_6

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 2565..3218

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding region of ABC-type glycine betaine transport system n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RE29_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 161.0
  • Bit_score: 230
  • Evalue 1.30e-57
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62721.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr UNIPROT
DB: UniProtKB
  • Identity: 70.8
  • Coverage: 161.0
  • Bit_score: 232
  • Evalue 4.60e-58
glycine betaine ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 163.0
  • Bit_score: 217
  • Evalue 3.10e-54

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Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGCAAAAAACTGCGCGCGTCGCCCTGGGCCTGGTCGGCCTGCTGGCGGCGGCGGGCTTCGCCGCGGGCTGCGGCAAGGCCGGTTCATCGGGTACCCAGGCGCCGGCCAGCAACGCCGCCGCGGGTGGGTGTGCCCCGGTCGCCGGCGACAAGCTGGTCGTCCTCACCGACGACAAGCACCTGCAGAACGCCGACAACGTGATCGCGGCGGTCAACGCCAAGGCCTCGTCGCCGGAACTGCTCGCCGCGCTGGACAAGGTGGCGGGCGCGCTCGACACCCCCAAGCTCGTCGCGCTCAACAAGGCCACCGACATCGACCACAAGACGTCCCCGGCGGCGGCACAGGAGTTCGCCACCGCCAACAACCTCACCAGCGGGATCGCCAAGGGTGCCGGTGGCAAGGTGACGATCGGGGCGGCCAACTTCCCGGAGAGCCAGACGCTCGCCGAGCTCTACAAGATCACACTGACCGCCGCCGGGTACACGGCGACCTCACGGAATTCCTCAACGGCAAGGCCAACGGAAAGACCGCGGCACCGGTCGCGTCCGGTGACGTGGACAAGACGGTGGCCGCGCTCAAGGAGTTCGGCACCAAGTACGGCCTCACCTTCGGCAAGCCCTCGCCGGCGGCCGACCAGAACGCGTTCGCGGTGA
PROTEIN sequence
Length: 218
MQKTARVALGLVGLLAAAGFAAGCGKAGSSGTQAPASNAAAGGCAPVAGDKLVVLTDDKHLQNADNVIAAVNAKASSPELLAALDKVAGALDTPKLVALNKATDIDHKTSPAAAQEFATANNLTSGIAKGAGGKVTIGAANFPESQTLAELYKITLTAAGYTATSRNSSTARPTERPRHRSRPVTWTRRWPRSRSSAPSTASPSASPRRRPTRTRSR*