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13_1_20cm_3_scaffold_17026_7

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 3215..3481

Top 3 Functional Annotations

Value Algorithm Source
glycine/betaine ABC transporter substrate-binding protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036DBAD9 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 88.0
  • Bit_score: 128
  • Evalue 2.70e-27
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:CCH21927.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonosp UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 88.0
  • Bit_score: 124
  • Evalue 7.20e-26
Glycine betaine/carnitine/choline-binding protein similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 88.0
  • Bit_score: 122
  • Evalue 5.50e-26

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Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 267
GTGACCACCGCGTTCGCCGACAAGTACGGCGTGAAGTCGCTGTCCGACTTCGCCAGCAAGTGCTCGGGCAAGGCGTCCATTCTCGGCGGCCCGGCCGAATGCCCGAAGCGGCCGTTCTGCCAGCAGGGCCTGGAGAACACCTACAAGATCGCTTTCGGCCAGTTCAAGTCGCTGGACGCGGGCGGCCCGCTGGTCAAGCAGGGGCTCAAGAGCGGCCAGATCAGCATCGGTCTCGCATTCACGTCCGACGCTGCGTTCGCGAGTTAG
PROTEIN sequence
Length: 89
VTTAFADKYGVKSLSDFASKCSGKASILGGPAECPKRPFCQQGLENTYKIAFGQFKSLDAGGPLVKQGLKSGQISIGLAFTSDAAFAS*