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13_1_20cm_3_scaffold_17030_1

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 1..564

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X4Z1_SALTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 365
  • Evalue 3.70e-98
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aura UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 365
  • Evalue 5.20e-98
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 187.0
  • Bit_score: 365
  • Evalue 1.00e-98

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Taxonomy

Micromonospora aurantiaca → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 564
AAGTTCTCCACGTACGCCACCTGGTGGATCCGACAGGCCATCACCCGGGCCATGGCCGACCAGGCCCGCACCATCCGCATCCCGGTACACATGGTCGAGGTGATCAACAAACTCGGCCGGATCCAGCGCGAGCTGCTCCAGGACCTGGGCCGCGAGCCCACCCCGGAGGAACTGGCCAAGGAGATGGACATCACGCCCGAGAAGGTACTGGAGATCCAGCAGTACGCCCGGGAGCCCATCTCGCTCGACCAGACCATCGGTGACGAAGGCGACAGCCAGCTCGGCGACTTCATCGAGGACTCCGAGGCCGTCGTCGCGGTCGACGCGGTCTCCTTCTCGCTCCTGCAGGACCAGCTCCAGCAGGTACTCCAGACGCTGTCCGAGCGCGAGGCCGGGGTCGTCCGGCTCCGGTTCGGCCTCACCGACGGGCAGCCCCGTACGCTGGACGAGATCGGGCAGGTCTACGGGGTGACCCGGGAGCGGATCCGGCAGATCGAGTCCAAGACCATGTCCAAGCTCCGGCACCCGTCGCGCTCGCAGGTACTACGCGACTACCTGGACTAG
PROTEIN sequence
Length: 188
KFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFSLLQDQLQQVLQTLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD*