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13_1_20cm_3_scaffold_1738_24

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 21831..22478

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, TetR family n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B2E9_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 197.0
  • Bit_score: 191
  • Evalue 6.40e-46
Uncharacterized protein {ECO:0000313|EMBL:ETK31110.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024 UNIPROT
DB: UniProtKB
  • Identity: 51.8
  • Coverage: 191.0
  • Bit_score: 197
  • Evalue 1.60e-47
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 197.0
  • Bit_score: 191
  • Evalue 1.80e-46

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
ATGAGCTCGCCCGGGTTGCGTGAACGCAAGAAGCAGAAGACCCGCTGGTCCATCCAGGAGCATGCGTTGCGGTTGTTCCAGCAGCAGGGGTACGAGCAGACGACGGTCGACCAGATCGCGGCGGCAGCGGAGATCTCCCCGAGCACGTTCTTCCGGTACTTCAAGACCAAGGAGGACGTGGTGGTCGAGGACGAGTACGACCCGCTGCTGCTGCGGCTGCTCGCCGACGAACCCTCGGACGAGCCGGTGATCCCGGCCCTGCGGCACGCCATCGCGACCGCCTTCGCGCACCTCGGCCCGACGGAGATGGCGCAGATCCGGCAGCGTACCGAGCTGATGCTGGCGGTACCGGCGCTGCGGATGCGGATGCTCGACAGCTTCACCGGCAGCCTGGACATGCTCGCCGCCGCGTTCGCCAGCCGGACCGGACGGGATCCCGCCGACCTCGAGGTACGCATCTCCGCCGGTGCAGTGACCGGCGCCATGATTTCGGTGATCTTCGCCTGGGTGGAGAGCGGTAATCAGGACGGCCTCGGCGAGCTCGTCGACCGGGCGCTCGCCCAGCTCGAGTCCGGACTGGTGCTGACCGGGCCGGCGAAGGCGAGCGCCCCCGCCAGGTCTGACGGGGGCGCTCCTACGAGGCGCTGA
PROTEIN sequence
Length: 216
MSSPGLRERKKQKTRWSIQEHALRLFQQQGYEQTTVDQIAAAAEISPSTFFRYFKTKEDVVVEDEYDPLLLRLLADEPSDEPVIPALRHAIATAFAHLGPTEMAQIRQRTELMLAVPALRMRMLDSFTGSLDMLAAAFASRTGRDPADLEVRISAGAVTGAMISVIFAWVESGNQDGLGELVDRALAQLESGLVLTGPAKASAPARSDGGAPTRR*