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13_1_20cm_3_scaffold_2290_23

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 25948..26538

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Longispora albida RepID=UPI000378F7D6 similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 179.0
  • Bit_score: 253
  • Evalue 2.10e-64
RNA polymerase sigma factor SigM {ECO:0000313|EMBL:KHD74389.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;" UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 200.0
  • Bit_score: 246
  • Evalue 2.80e-62
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 190.0
  • Bit_score: 245
  • Evalue 9.60e-63

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Taxonomy

Actinoplanes utahensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGGACGATCCGCGGGTACCCGACGACGGGGCCCTGCTGCGCGCCCACCTCGCCGGCGATCCGCACGCCTTCGGCCAACTGGTACGCCGGCACCAGGACCGACTCTGGGCGGTGGCGCTGCGTACCCTCGGCGACCGGGAGGAGGCCGCCGACGCCCTCCAGGACGCGCTGATCTCGGCGTACCGCTCGGCCGACCGGTTCCGGGGCGAGTCCGCGGTCACCACGTGGCTGCACCGGATCGTGGTCAACGCCTGCCTGGACCGGATCCGCCGGCGGGCGGCCCGGCCGACGGTACCGTTGGTGGAGACCACCCCCGTACCCGTACCGGTGGTCGACTCGGACACCGTGCTGGACGTACGGGCCGCTCTCCAGCGGCTGCCCGCCGACCAACGTGCCGCGCTCGTCCTGGTCGAGGTGCAGGGGTACTCGGTCGCCGAGGCGGCGGCGATCCTCGGCATACCCGACGGCACGGTCAAGAGCCGGTGCGCCCGCGGCCGGGCGAGACTTGCCGCACTCCTCGGGTACCTGCGGAACCCGCCGTCCGGGGCGGACGTCCCATCTCAGACAACGAACCGCGAGGAGAGGCGGTGA
PROTEIN sequence
Length: 197
VDDPRVPDDGALLRAHLAGDPHAFGQLVRRHQDRLWAVALRTLGDREEAADALQDALISAYRSADRFRGESAVTTWLHRIVVNACLDRIRRRAARPTVPLVETTPVPVPVVDSDTVLDVRAALQRLPADQRAALVLVEVQGYSVAEAAAILGIPDGTVKSRCARGRARLAALLGYLRNPPSGADVPSQTTNREERR*