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13_1_20cm_3_scaffold_230_11

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(11333..11824)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S5J0_MICSL similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 176.0
  • Bit_score: 212
  • Evalue 4.60e-52
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 176.0
  • Bit_score: 212
  • Evalue 6.40e-52
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 176.0
  • Bit_score: 212
  • Evalue 1.30e-52

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Taxonomy

Micromonospora aurantiaca → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGAATTCCGCACCCGACCCGGCCAGGGATCCGACCGGGTTCGTCCGGGCGACGCAGCCCGAGGTATGGCGGTTCACCGCGGCCCTGGTCGACCCGGCCAGCGCCGACGACCTCACCCAGGAAACCTACCTGCGGGCCTTCCGGGGGCTCACCGATTTCGCCGGTCGCTCGTCCGTGCGCACCTGGCTGCTGGCCATCGCCAGGCATGTCTGCGCCGATCACATCCGGACCTTGCAGCGCCGCCGCCGGCTCGACGCCCGCCTTCCCGAACCCTCACCGGTACCGGACGCCGCCGGCGTTGTCGGCGCGCTGGACCTGTTGCGTGGGCTGCCCGACGAGCGGCGCGAGGCGTTCGTGCTGACCCAGCTGGTCGGCCTGTCCTACGAGGAGGCGGCCGACTCGTGCGGGGTACCGGTGGGCACCATCCGCTCCCGGGTCGCGCGCGCCCGCATACAGCTGGTCGCCGCGGTGACCGCGGGGACTTCGCGGTAG
PROTEIN sequence
Length: 164
VNSAPDPARDPTGFVRATQPEVWRFTAALVDPASADDLTQETYLRAFRGLTDFAGRSSVRTWLLAIARHVCADHIRTLQRRRRLDARLPEPSPVPDAAGVVGALDLLRGLPDERREAFVLTQLVGLSYEEAADSCGVPVGTIRSRVARARIQLVAAVTAGTSR*