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13_1_20cm_3_scaffold_3380_1

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 2..424

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=47853 species="Bac UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 109.0
  • Bit_score: 115
  • Evalue 5.30e-23
2''''-5'''' RNA ligase n=1 Tax=Salinispora arenicola RepID=UPI00036E4616 similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 109.0
  • Bit_score: 111
  • Evalue 7.20e-22
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 109.0
  • Bit_score: 111
  • Evalue 2.00e-22

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Taxonomy

Micromonospora carbonacea → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 423
GCCGGGCAGTCCCCGCCGGTGTTGCGGATCGCCGGTGGCGGGCGCTTCGGTCGCGGGAAGTTCACCGTGCTCTGGGCCGGCATCGAGGGCGATCTGCAACCGCTGCGCCGGTCGGTCACCCGCGAGCTCAAGCGGGCCCGGCTGCCGTACGACGCCAAGCGCTTCCACCCGCACCTGACGATCGCCCGGCCCGGCGACCGGGTACCCGTGGACGGCGACGCCGAGGCCCTGAAGTCCTACGAAGGTCCACAGTGGACAGTCGAGGAGGTCCGCGTGGTGCGCTCGTACCTCGGCCCGAAGCCGAGGTACGAGACGCTCCACACGGCGGTTGTCACCAGGCCCATGCCTCCGGGCCCGGTCCCCCGTTCCCAACCGGCGGGAAAAGTTCGTCGAGCCGGGCCAGCGTCGGATCGTCCAGCGTGA
PROTEIN sequence
Length: 141
AGQSPPVLRIAGGGRFGRGKFTVLWAGIEGDLQPLRRSVTRELKRARLPYDAKRFHPHLTIARPGDRVPVDGDAEALKSYEGPQWTVEEVRVVRSYLGPKPRYETLHTAVVTRPMPPGPVPRSQPAGKVRRAGPASDRPA*