ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

13_1_20cm_3_scaffold_7943_4

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(3940..5424)

Top 3 Functional Annotations

Value Algorithm Source
Putative glycosyltransferase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VXM3_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 504.0
  • Bit_score: 587
  • Evalue 1.60e-164
Hydrolase, HAD-superfamily, subfamily IIIA {ECO:0000313|EMBL:CCH17431.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospo UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 522.0
  • Bit_score: 542
  • Evalue 4.80e-151
putative glycosyltransferase similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 504.0
  • Bit_score: 587
  • Evalue 4.40e-165

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
ATGTTGTACGACCCCGGGAATCGCTGGCACATGGCGAACGTGGGGCGGTTGACCGAGGCCGTTCTCTTCGATCGGGACGGCACGCTCGTCCGGGACGTTCCCTACAACGGGGACCCGGACGCCGTCGTCGTCATGCCGGGCGCCCGGGAGGCGCTGGACCGGCTGCGGGCCGGGGGCGTGCGGCTCGGCGTGGTCACCAACCAGTCCGGCATCGCCCGGGGGCGGCTGACCCGCGCCCAGGTCGACGCGGTCAACGCGCGGGTGGCGGAGCTGCTCGGGCCGTTCGACGTCTGGCAGGTCTGCCCGCACGACGAGGACGCGGGGTGCGCCTGCCGCAAGCCGGCGCCCGGGATGGTCCACGCGGCGGCGCGCGCGCTCGGTACCGACCCGACCCGGTGTGTCGTGGTCGGCGACATCGGGCGGGACATGGTGGCGGCGGGCGCCGCCGGCGCGCTCGGCGTGCTGGTACCGACGGAGGTGACCCGGCCGGCGGAGATCGCTGCCGCACCGGTCGTCATGCCCGATCTGGCCGCGGCCGGGGACTGGGTACTGAGCCGCGCCTTCCCGCCTGCGCCCGGCCGGCGGCCCGGCGGCCACGTGCTCGCGGTGCGCTCCGACTCGGCCGGCGACGTCCTGCTCACCGGCCCCGCGCTGCGCGCGCTGGCGGCCGGCGCGGACCGGCTGACCCTGCTGTGCGGCCCGCGCGGCGAGGCGGCCGCGGACCTCCTGCCCGGCGTGGACGAGCTGATCAGCTGGCACACCCCGTGGATCGACCCGGAACCCAAGCCGGTCGACCCGGTGAAGGTCAACGCGCTGGTCGACCGGATCGCCGGGCTGGCCGTCGACGAGGCGGTCGTGTTCACCTCGTTCCACCAGTCGCCGCTCCCGTTCGCGCTGCTGCTGCGGCTGGCCGGGGTGTTGCGGATCAGCGCTGTCAGCGTGGACTACCCGGGGTCGCTGCTCGACGTACGGCACCGGGTGGACGACCGGCTGCCGGAACCCGAGCGGGCGCTGTCCCTGGCCGCCGCGGCCGGCTTCGGCCTGCCGGCGGNNNNNNNNNNNNNNNNNNGGGAGATCGTCGTCGCGCTGGCCACGGCCGGGCGCCCCGTCGTGGTGACCGGCAGCCCGCAGGAGCGGGAGCTGACCCGGTACGTGGCCGGTGCCGAGGCGCTGGACCTCGGCGGGCGCACCCGGCTGGACCAGCTCGCCGGGGTACTGGCCGACGCCTCGTGCCTGGTCTGCGCGAACACCGGTCCGGCACACCTGGCCGCGGCCGTCGGTACCCCCGTGGTGAGCCTCTTCGCGCCGACCGTTCCGTTCGGGCGGTGGGCGCCCTACCGGGTGCCGCACGTCCGGCTCGGCGACCCGCTGGCCGGCTGCCGCGACACGCGCGCCGCGACCTGTCCGGTACCGGGGCACCCGTGCCTGTCCACGGTTCCCGGTGCGGAGGTCGTGGCCGCCGTCGAGCTGCTGGCGCAGTCGTGA
PROTEIN sequence
Length: 495
MLYDPGNRWHMANVGRLTEAVLFDRDGTLVRDVPYNGDPDAVVVMPGAREALDRLRAGGVRLGVVTNQSGIARGRLTRAQVDAVNARVAELLGPFDVWQVCPHDEDAGCACRKPAPGMVHAAARALGTDPTRCVVVGDIGRDMVAAGAAGALGVLVPTEVTRPAEIAAAPVVMPDLAAAGDWVLSRAFPPAPGRRPGGHVLAVRSDSAGDVLLTGPALRALAAGADRLTLLCGPRGEAAADLLPGVDELISWHTPWIDPEPKPVDPVKVNALVDRIAGLAVDEAVVFTSFHQSPLPFALLLRLAGVLRISAVSVDYPGSLLDVRHRVDDRLPEPERALSLAAAAGFGLPAXXXXXXXEIVVALATAGRPVVVTGSPQERELTRYVAGAEALDLGGRTRLDQLAGVLADASCLVCANTGPAHLAAAVGTPVVSLFAPTVPFGRWAPYRVPHVRLGDPLAGCRDTRAATCPVPGHPCLSTVPGAEVVAAVELLAQS*