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13_1_20cm_3_scaffold_906_4

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: comp(1390..3336)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=219305 specie UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 608.0
  • Bit_score: 752
  • Evalue 5.20e-214
Transcription termination factor Rho n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RQ92_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 608.0
  • Bit_score: 753
  • Evalue 1.70e-214
  • rbh
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 622.0
  • Bit_score: 731
  • Evalue 1.90e-208

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Taxonomy

Micromonospora sp. ATCC 39149 → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1947
TTGAGCGACACCACCGACGTGACGTCGGATGTCTCCAGCGTCCCGGCGTCGGAGGAGGCGGCGGGCGCTGCCCGGCGCCGGCGCACTGGCAGCGGCCTCGCCGGGATGCTGCTTTCCGAGCTGCAGAGCTTGGCCTCGTCGCTCGGTATCTCCGGCACCGGCCGGATGCGCAAGGGCGAGCTGATCGCCGCCATCCAGGAACGGCAGGGCGGCGAGGGCCGGGTACCCGGTCCGCGGGCAACGGACGCCGGCCGCGAGGTGGCGGCCCGGGTCGAGGCACCGGCCCGTGAGGTACGGGCCGAGGTGTCCGAGCCGGTCCAGCCGGCCCTCATCGATCGGCCGGTCGAGAGCGCGCGGCGCGAGCGTGAGCCGTCGGTCCGTGAGTCGTCCGGCCGTGAATCGTCCGGCGAGGCCAACGGCGTCCGGACGTCCCGGCGGGCCTCCCGCCCGGCCGGCCCGCCCGAGCCGCGCGCCGACGCGCCGCGGGTCGAGACGGACGAGCGACCGGCCCGGTCCGACAGTGGCCGCACTGAGAGCGGCCGCACCGAGGGCGGGCGTACCGAGGGTGGCCGCACCGAGAACGGCCGTGTCGACACCGTCGAGCGGGACAACCGCCGCGAGCGTGCCGACCGTGACCGCGGTGGCGACCGTGACCGTGGTGGCGACCGTGACCGTGGTGGCGACCGTGACCGTGGTGGCGACCAGCGCACCGACCAGCGCACCGAGCGGGGCGAGCGCCCGGAGCGGGACAACCGCAACGAGCGGGACGACGATGGCGGGGACGGCGAGGGCGGCGGCCGGCGCGGCCGGCGCAGTCGGTTCCGTGACCGGCGGCGGGGTCGCGGCGAGAGCGGCGGCGAGCGCAACGAGCGGCCCGGTGGCGGCGAGCCGGCGGTCGCCGAGGACGACGTCCTGATACCGGTCGCCGGGATCGTGGACGTGCTCGACAACTACGCGTTCGTGCGCACCTCCGGGTACCTGTCCGGGCCGAACGACGTCTACGTCTCGATGGCACAGATCAAGCGGTACGGGCTGCGTCGCGGCGACGCGGTGACCGGCGCCGTCCGGACCGCCCGGGACAACGACGCCGGCCAGGGCTCGTCGCGGCGGGACAAGTACAACCCGCTGGTCCGGCTGGACACGATCAACGGGATGGACCCGGAGGAGGCGCGCCGCCGCCCGGAGTTCTACAAGCTCACCCCGCTGTACCCGCAGGAGCGGCTGCGGCTGGAGACCGAGCCGCACATCCTCACCACCCGGGTCATCGACCTCGTGATGCCGATCGGCAAGGGCCAGCGGGCCCTGATCGTGTCGCCGCCGAAGGCCGGTAAGACCATGGTGTTGCAGGCGGTCGCGAACGCGATCACCCACAACAACCCGGAGTGCCACCTGATGGTCGTGCTCGTGGACGAGCGGCCGGAAGAGGTCACCGACATGCAGCGCTCGGTGAAGGGCGAGGTCATCGCCTCGACCTTCGACCGGCCGCCGTCGGACCACACCACGGTCTCCGAACTGTCTATCGAGCGCGCCAAGCGGCTGGTCGAGCTGGGCCACGATGTGGTCGTACTGCTCGACTCGATCACCCGGCTGGGTCGGGCGTACAACAACGCCTCGCCGGCGTCGGGTCGGATCCTGTCCGGTGGTATCGACTCCACCGCCCTGTATCCGCCGAAGCGGTTCCTGGGTGCGGCCCGCAACATCGAGAACGGCGGTTCGCTGACGATCCTCGCCACCGCGTTGGGGACCGGAAGATCGCCGACAAGCGGGTGTTCCCGGCGATCGACATCGACCCGTCCGGTACCCGTAAGGAAGAGATCCTGCTCGCGCCCGACGAGCTGGCGATCGTGCTCAAGCTCCGCAAGGTGTTGCACGCGCTGGATTCCCAGCAGGCGCTGGACCTCCTGCTCGACCGGCTCAAGAAGACCCGGACGAACATCGAGTTCCTGA
PROTEIN sequence
Length: 649
LSDTTDVTSDVSSVPASEEAAGAARRRRTGSGLAGMLLSELQSLASSLGISGTGRMRKGELIAAIQERQGGEGRVPGPRATDAGREVAARVEAPAREVRAEVSEPVQPALIDRPVESARREREPSVRESSGRESSGEANGVRTSRRASRPAGPPEPRADAPRVETDERPARSDSGRTESGRTEGGRTEGGRTENGRVDTVERDNRRERADRDRGGDRDRGGDRDRGGDRDRGGDQRTDQRTERGERPERDNRNERDDDGGDGEGGGRRGRRSRFRDRRRGRGESGGERNERPGGGEPAVAEDDVLIPVAGIVDVLDNYAFVRTSGYLSGPNDVYVSMAQIKRYGLRRGDAVTGAVRTARDNDAGQGSSRRDKYNPLVRLDTINGMDPEEARRRPEFYKLTPLYPQERLRLETEPHILTTRVIDLVMPIGKGQRALIVSPPKAGKTMVLQAVANAITHNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTTVSELSIERAKRLVELGHDVVVLLDSITRLGRAYNNASPASGRILSGGIDSTALYPPKRFLGAARNIENGGSLTILATALGTGRSPTSGCSRRSTSTRPVPVRKRSCSRPTSWRSCSSSARCCTRWIPSRRWTSCSTGSRRPGRTSSS*