ggKbase home page

13_1_20cm_3_scaffold_98_13

Organism: 13_1_20CM_3_Actinobacteria_71_11

partial RP 40 / 55 MC: 3 BSCG 35 / 51 MC: 4 ASCG 12 / 38 MC: 5
Location: 17645..18700

Top 3 Functional Annotations

Value Algorithm Source
twitching motility protein PilT n=1 Tax=Kribbella catacumbae RepID=UPI000376ACA8 similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 346.0
  • Bit_score: 361
  • Evalue 1.30e-96
Type IV pilus assembly protein PilT {ECO:0000313|EMBL:AEK43014.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediter UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 344.0
  • Bit_score: 354
  • Evalue 1.30e-94
pilT; type IV pilus assembly protein PilT similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 344.0
  • Bit_score: 354
  • Evalue 2.60e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1056
ATGTGGGCGATGACACTCGACCAGGCGCTCGAGCGTTTGATCGCGGTCGGCGGATCAGATCTGCTGCTCAGCTGCGGAAGCAAGCCGCGCGTCCGCAAGGACGGCAAGCTGGAGATCCTCGACCCCAGCGCCGCGGTGCTCGGGCCGGAGGACACGCTCAAGCTGATTCGCGAGCTGCTCGCACCCAGGCAGTGGGATGAGCTGACCGATCGTCGGAATGTCGACTTCTCGTTCACCTGGCGGGGCACCGCTCGCATCCGAGGCAACGCATACCATCAGCGGAACTCGCTCGCAGCCTCCTTCAGGCTCCTTCCGCTGGCCATTCCTGGCTTCGACATGCTGGGCATCCCGGAGTCTGTCCACCGCCTCCTCGAGCGGCAGCATGGCCTGATTCTCGTCACCGGCCCGACCGGATCAGGCAAGTCGACCACCCAGGCCGCGATCATCGATCACCTCAACGCGACGCGGCCCTTCCACATCATCACGATCGAGGACCCGATCGAATACGTTCATAAGCACAAGCAGTCGATCGTCGATCAGCGGCAGGTGGGGGAAGACACCCACTCATTCGCGGAGGGCCTCCGCGCCGCGTTCCGGGAAGATCCCGACGTCCTCCTGATCGGCGAGATGCGAGACCTCGAGACGATCACGGCCGCCGTCACCATCGCGGAGTCGGGCCACCTGGTGCTGGCGACGCTGCACACGAACGACGCGCCCCAGGCTCTCGATCGAATCATCGACAGCTACCTTGGCGCGCAGCAGCAGCAGGTGCGCATCCAGCTGGCCGGCTGCCTGGCCGGCGTCATCTACCAGCAGCTGGTGCCGGCCATCGGGGGCGGGAGGGTGGCTGCCTTCGAGGTTCTCATCGCCAACACCGCAGTCAGGGCGATGATCAAGGAAGCCAGGACCGACCAGATCCGGTCGGTCCTTCAAACCAGCCTGCGTGAGGGATCTCAGACATTGGAGAGGTCGCTGAACCAGCTCATGCGCGCCGGGCTCATCACCGAGCAGTCGGCGCGCACACACTCGATCAGCCCGAGCGAGATCCGCGCCTAA
PROTEIN sequence
Length: 352
MWAMTLDQALERLIAVGGSDLLLSCGSKPRVRKDGKLEILDPSAAVLGPEDTLKLIRELLAPRQWDELTDRRNVDFSFTWRGTARIRGNAYHQRNSLAASFRLLPLAIPGFDMLGIPESVHRLLERQHGLILVTGPTGSGKSTTQAAIIDHLNATRPFHIITIEDPIEYVHKHKQSIVDQRQVGEDTHSFAEGLRAAFREDPDVLLIGEMRDLETITAAVTIAESGHLVLATLHTNDAPQALDRIIDSYLGAQQQQVRIQLAGCLAGVIYQQLVPAIGGGRVAAFEVLIANTAVRAMIKEARTDQIRSVLQTSLREGSQTLERSLNQLMRAGLITEQSARTHSISPSEIRA*