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13_1_20cm_3_scaffold_1337_5

Organism: 13_1_20CM_3_Chloroflexi_54_15

partial RP 30 / 55 BSCG 29 / 51 MC: 2 ASCG 8 / 38 MC: 2
Location: 9737..10306

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6I8_SPHTD similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 173.0
  • Bit_score: 138
  • Evalue 5.70e-30
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ39613.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 173.0
  • Bit_score: 138
  • Evalue 7.90e-30
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 173.0
  • Bit_score: 138
  • Evalue 1.60e-30

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Taxonomy

Sphaerobacter thermophilus → Sphaerobacter → Sphaerobacterales → Sphaerobacteridae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 570
ATGTCATCAGACATCAGAAACCGGCCTATCCTTGCCTCAACCAGCGAAGCGTCGTTTGAAACAGTTTTTACACGCTACTATAGCCTGGTCTATCAACTCGCCTATCGCTGTGTGGGACAGAGCGACGAGGCGGAAGATATCGCTCAAGAAGTTTTCCTGCGTTACCACCGTGTACCGCCTAAAGCCGAAAGCGAAGCAGAACGACGCTCATGGCTCTGCCGTGTCGCCACCAACCTCGGCCTGAATGCCTTGCGGAGCAGGCAGCGGCGCACAAAACGCGAGGAACAGGTCAGCGAAACAGTTCGACGAAGCACACCTGAGGCAGAGGCACAACAAGACCCCGAGCAACATGTGCTCATCAGTGAACAGGCAGCTCTGGTACGCTCGATTCTGGCGGAAATGCCCGAACGACAACAGGCGTATATTTTATTGCGTAGTACAGGTTTAAGTTATGCCGAAATCGCGCAAGCTACAGGCGTAGCAACAGCTTCTGTGGGCGCGTTATTGGCCCGTGCTGAACGGGAATTTCGCAGGAGGTATCATGAACGAGTTACAGCACCCAGAGCATAA
PROTEIN sequence
Length: 190
MSSDIRNRPILASTSEASFETVFTRYYSLVYQLAYRCVGQSDEAEDIAQEVFLRYHRVPPKAESEAERRSWLCRVATNLGLNALRSRQRRTKREEQVSETVRRSTPEAEAQQDPEQHVLISEQAALVRSILAEMPERQQAYILLRSTGLSYAEIAQATGVATASVGALLARAEREFRRRYHERVTAPRA*