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13_1_20cm_3_scaffold_3125_11

Organism: 13_1_20CM_3_Alphaproteobacteria_64_12

partial RP 29 / 55 MC: 1 BSCG 28 / 51 ASCG 5 / 38
Location: comp(9772..10428)

Top 3 Functional Annotations

Value Algorithm Source
putrescine/spermidine ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI0003624C35 similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 218.0
  • Bit_score: 402
  • Evalue 2.40e-109
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source=" UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 218.0
  • Bit_score: 401
  • Evalue 7.60e-109
substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 87.2
  • Coverage: 218.0
  • Bit_score: 398
  • Evalue 9.90e-109

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Taxonomy

Bradyrhizobium sp. LTSP849 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
GGTCCCGATGCCAGGATCGACAGTTGGGACGCCGTTTTCAAACCGGAGAACATCGCGAGATTCAAAGATTGCGGCATTCACATGCTCGATTCGGCGGACGATATCTTTCCGGCCGCGCTGAGCTATCTTGGGCTTGATCCCAATTCGACGAAGCAGGCGGACCTCCAAAATGCCGCCGATCTCATTTTGAAAATCAGGCCTTACGTCCGAAAGTTTCATTCATCCGAATATCTGAGCGCGCTGGCCACCGGAGAAATTTGCCTGGTGGTGGGCTGGTCGGGAGACATCATGCAGGCGCGCAGCCGAGCCGCTGAGGCAAACAACGATATCGAGATCGGCTACGCCGTTCCTAAGGAGGGCGCACAGATGTTTTTCGACAATCTCGCCATTCCTGGTGATGCGAAGAATGTTTCCGAAGCCTACGAGCTGATCAACTATCTCTACCGGCCCGAGGTCGCGGCCAGGAATTCCGATTTTCTGTCCTACGCCAATGGTAATCTGGCAAGCCAGAAGCTGATCGACCCGAAAATTCTCAATGACAAGAACATCTATCCTGACGAGGCGACACTGAAGAAGCTGTTCGTGATCACCGCGCGCGATCCTGCCACCCAGCGCGTCATCAACCGGCTCTGGACCAAGGTGAAGACCGGACGCTAG
PROTEIN sequence
Length: 219
GPDARIDSWDAVFKPENIARFKDCGIHMLDSADDIFPAALSYLGLDPNSTKQADLQNAADLILKIRPYVRKFHSSEYLSALATGEICLVVGWSGDIMQARSRAAEANNDIEIGYAVPKEGAQMFFDNLAIPGDAKNVSEAYELINYLYRPEVAARNSDFLSYANGNLASQKLIDPKILNDKNIYPDEATLKKLFVITARDPATQRVINRLWTKVKTGR*