ggKbase home page

13_1_20cm_3_scaffold_1091_15

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: 12270..13940

Top 3 Functional Annotations

Value Algorithm Source
Putative N-acetylmuramyl-L-alanine amidase,negative regulator of AmpC, AmpD n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0DYQ3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 246.0
  • Bit_score: 171
  • Evalue 3.00e-39
Putative N-acetylmuramyl-L-alanine amidase,negative regulator of AmpC, AmpD {ECO:0000313|EMBL:CCH69587.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetraspha UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 246.0
  • Bit_score: 171
  • Evalue 4.20e-39
peptidase M14 family protein similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 237.0
  • Bit_score: 141
  • Evalue 9.50e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetrasphaera elongata → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1671
ATGGGGGCGGTGAGGAGCTTCCGTCCCCCAAACCGGGCGCTTGCGCCGGCGATCGTCATTTGTGCGCTGGCGACGCTTGGCCGGGCCGCCGGCCCCGCGGCCGGCGGGGCCGGCGGCCCGGCGGCGCCCCAGCCCTCGACGCGGATCACCGCCTCGCCGGGGCCGAAGACGTTCCAGCGCCGCCCCAGCTTCAGCTTCGAGTCGCCGTCGGGCGGCGCGGTCCGCTTCCAGTGCGCGCTGGGGCGGCATCAGTGGCGGCGCTGCTCGTCCCCGCACCGCACCCGGCGGCTGGCTCACGGATGGCACGGGTTCAGGGTGCGCGCCCTCGGCGCTGGCGGGGTCGCCGACCCCACGCCCGCCCGACGGCGCTTCCGGGTGCTTCGGCGGCGAGTGTCGTTCGGCCACTCCATACGGGGGACCGAGCTGGACGCGGTGCGACTGGGGGATCCGAACGCGGCGCGCACGGCGCTCGTCGTGGGCTCGATCCACGGCAACGAGCCCGAGGGCCAGGAGATCCTGCACGTCCTCAAGCGGTCCCACCGCAACCTGCGCCGGGTCGAGCTGTGGGTTGTGCAGTCCGTCAACCCGGACGGGGTGCAGGCCCGTACGCGCCAGAACGCTCGCGGCGTCGACCTGAACCGAAACTTCTCCTACCGCTGGAGGGGAGGGGTTCCCCGGTCGAGCGGCTACTACCCCGGCCCCCACCCGTTCTCGGAGCCCGAGAGCCGCGCCGTCAGGGGCCTGGCGAAACGGCTCCGGCCGCGGGTGACCATCTGGTACCACCAGCCGTGGGGCCGGGTCCTCTTGCCGTGTCATGGGCCGGCGACGATTCAGAAGCGCTACGCCCGGATCGCGCGGCTGCCGACCGACCGCTGTCGCGGGCAGCGGCTGCCCGGCACCGCGACGAGCTGGCAGAACCACCATCTCCCCGGCACTGCGTTCGTGGTCGAGTTGCCGGGCGGCGAACTGCCGAACCGCCAGGCGCGCCGCCACGCTCGCGCGGCGGCGAAGGTGGCGGCGGGCCGCGCCGGGGCCGCGCATGCGGCGGCCAGCCGTCAGTCGGGCAGCTCGGCCCGCGACAGGTTGCGGCGGCCGCGCCTCGATCGCGACCCGATCCCCTACGGGCACCAGCGAAGGCACGAGATGGCCGCCTACTCCAAGCGCCACTACGGAAAGCGCCGGTGGCGACTTCGGCATCCGCGAGTGATCGTCCTGCTCTTCACCGACGGCCCGACCTACAGGTCCGCTTGGAACGCGTTCGCCCCCGACGCGCCGAACATGGGAGAGCTGCCCGGTGTCTGCTCGCACTTCGTGGTCGGAAAGAACGGGCGCATCCACCGGCTCGTACGGCCGGGGATCCGCTGCCGCCACGCAATCGGCCTGAATCACCGCGCGATCGGCGTGGAGATGGTGCAGCAGGGCGGGCGAAGCTCGCACTGGGCCGACCGCCAGATCCTTCACCGTCACCGTCAGATCCACGCCGCTCTGCATCTGGTCGGCTGGCTCAAGCAGCGGTTCGGGATCAGGATGCGCGACGTGATCGGCCACGCGATGGCCAACCAGAGCCCCTACTTCAAGGACCTGGAGGGATGGCGCAACGACCACACCGACTGGCTGCGCCGTGACGTGCTCAAGTTCCGCCACCGGCTCACCCGATTGCTGAGACGGTGA
PROTEIN sequence
Length: 557
MGAVRSFRPPNRALAPAIVICALATLGRAAGPAAGGAGGPAAPQPSTRITASPGPKTFQRRPSFSFESPSGGAVRFQCALGRHQWRRCSSPHRTRRLAHGWHGFRVRALGAGGVADPTPARRRFRVLRRRVSFGHSIRGTELDAVRLGDPNAARTALVVGSIHGNEPEGQEILHVLKRSHRNLRRVELWVVQSVNPDGVQARTRQNARGVDLNRNFSYRWRGGVPRSSGYYPGPHPFSEPESRAVRGLAKRLRPRVTIWYHQPWGRVLLPCHGPATIQKRYARIARLPTDRCRGQRLPGTATSWQNHHLPGTAFVVELPGGELPNRQARRHARAAAKVAAGRAGAAHAAASRQSGSSARDRLRRPRLDRDPIPYGHQRRHEMAAYSKRHYGKRRWRLRHPRVIVLLFTDGPTYRSAWNAFAPDAPNMGELPGVCSHFVVGKNGRIHRLVRPGIRCRHAIGLNHRAIGVEMVQQGGRSSHWADRQILHRHRQIHAALHLVGWLKQRFGIRMRDVIGHAMANQSPYFKDLEGWRNDHTDWLRRDVLKFRHRLTRLLRR*