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13_1_20cm_3_scaffold_1436_6

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: 5170..6282

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma factor includes region 2 n=1 Tax=Patulibacter medicamentivorans RepID=H0E4X7_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 64.6
  • Coverage: 370.0
  • Bit_score: 475
  • Evalue 3.80e-131
Putative sigma factor includes region 2 {ECO:0000313|EMBL:EHN11272.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source= UNIPROT
DB: UniProtKB
  • Identity: 64.6
  • Coverage: 370.0
  • Bit_score: 475
  • Evalue 5.40e-131
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 326.0
  • Bit_score: 392
  • Evalue 1.60e-106

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGGAGGTGAGCATCAGCCCGGCAGCGCACCACCGAGATCTGCTCGAGGCAGCCCGCGGGGGCGACGAGAACGCCTACGCCAGCCTGGTCGAGCCACATCGTTCCGAGCTCCACGCGCACTGCTACCGGATGCTCGGCTCGGTCCACGATGCCGAGGACGCGCTCCAAGAGACGCTCCTGCGGGCGTGGCGCGGCCTGTCGAGGTTCGAGGGCCGGAGCTCACTCCGCTCGTGGCTCTACACGATCGCCACCAACACGTCGCTGAACCTGATCGAGAAGCGCCCCAAGCGGGTGCTCCCCATCGACTACGCGCCCGCGGCCGACCCGCACCAAGGCCCCGGCGAGCCCGTGGTCGAGTCGGTGTGGGTGGAGCCCTATCCGGACGAGAAGCTCGGCCTCGAGGACGGCTACGCGGCTCCCGAGGCCCGCTATGAGCAGCGCGAGAGCGTCGAGCTGGCGTTCGTCGCGGCGCTCCAGCACCTGCCGCCCAACCAGCGCGCGGTGCTGATCCTGCGCGAGGTGCTCGGCTTCTCCGCCAAGGAAGTGGCGGTCGCGCTCGAGACCACCACCGCGTCGGTGAACAGCGCCCTCCAGCGCGCCCGCGCGACCGTCGACGAGCGCCTGCCCGAGCAAACCCAGCAGGCCACCCTGCGCTCGCTCGGCGACGAGAAGCTACGCCAGATCGTCGATGCGTACATCGACGCGTGGGAACGCTCTGACGTCGAGGCGGTCGTCGAGATGCTGACCGAGGATGCCTCGTTTTCGATGCCGCCGCTTCGTACCTGGTTCGGCGGTCGCGAGGCGATCCGGATCTTCCTGGCCGGATGGCCACTCTCTGGCCAGTGGCGCTGGCGCCCGATCCCGGTTCGCGCAAACGGACAGGTTGCACTCGCCTTCTACAGCTGGGACGAGGCGGAGGCGGCTTACATGCCATTCGCGCTCAATGTGTTGGCCTTCAGCGGCGAGCGGATCAGTGCCGTCACCGCCTTCATCACGCGCTCCGCACCAAGCGCGGATCGCGAGGTCGTCGCGCGCATGCCCGAGCACCCGTATCAACCCGAAGCGCTCGCCGCGGCGTTCGGGAACCTCGGCCTGCCCGACCGGCTGGACTGA
PROTEIN sequence
Length: 371
MEVSISPAAHHRDLLEAARGGDENAYASLVEPHRSELHAHCYRMLGSVHDAEDALQETLLRAWRGLSRFEGRSSLRSWLYTIATNTSLNLIEKRPKRVLPIDYAPAADPHQGPGEPVVESVWVEPYPDEKLGLEDGYAAPEARYEQRESVELAFVAALQHLPPNQRAVLILREVLGFSAKEVAVALETTTASVNSALQRARATVDERLPEQTQQATLRSLGDEKLRQIVDAYIDAWERSDVEAVVEMLTEDASFSMPPLRTWFGGREAIRIFLAGWPLSGQWRWRPIPVRANGQVALAFYSWDEAEAAYMPFALNVLAFSGERISAVTAFITRSAPSADREVVARMPEHPYQPEALAAAFGNLGLPDRLD*