ggKbase home page

13_1_20cm_3_scaffold_3045_2

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: 589..1668

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W125_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 341.0
  • Bit_score: 253
  • Evalue 3.00e-64
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EPR76355.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;" UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 341.0
  • Bit_score: 253
  • Evalue 4.20e-64
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 335.0
  • Bit_score: 231
  • Evalue 4.50e-58

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leifsonia rubra → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGCCAGGGAGGGGCGGCGGGGCGATCGACCGCGACGGCGGGCGCCGGGCACGTACCAACGTGACGCTGGAGGATGTCGCCCGCGTTGCCGGCGTCCATTACTCGACCGTATCCCGCGCGCTCGACCCGGCCAAGGTCTGGCGGGTGAATGTCAGCACCCGCAAACACGTCCAGGCGGTCGCCCGCCGGATGGGCTATCAGCCCGACATGGTGGCCAGCGGCCTGAAGCGCGGTCGGACGAACACGATTGCCGTCGTCGTGGGCGACCTGGGCAATCCCCGCCTCGCGCCAGTCTTGCGCGGCATCGCGAACCGGTTGGAAGCCGCGGGACTGATGTCGCTGATCGGCGAAACTCAGGACGATTCGGGGCGCCTGAAGCGCATCCTCAATCACCTGTTGAGTCGTCGCGTCGACGGCATGATCATGACCGCCGCGCGACTCCGCGACGGCGCCACGCTGCGCCGCATCCGCCGCCAGGGCATGCCGCTCGTGCTCGCGGTTCAAGACGTGCCGGGCATCCGCTTGCCCGCTTGCACCAACGACGACCTCCTCGGCGGCGTTCTGGCCGCCCAGCATCTCCTCTCGCTCGGGCATCGGCGCTTCGCGCAACTCCGCGGGCCCACCGACATCTACTCCTGCGTCCAGCGGGCCGAGGGCTTCAGCCGGACGATCGCGGCGGCCGGCGCCGTCGAGGTGGTGGTCCGCGCGATCGCCACCACCGGATCGCACGAAGAGGGGGAGCTCATGATGGGTAGCCTGCTCGACCGCAAGGGGACTCGGCCGACCGGCATCTTCGCCCATAACGACCTGGTCGCGTTCGGCGCGCTGACGGCCGCAGAGCAACGCGGCTTGATCTGCCCCAAGGACCTGTCGATGGTCGGCTACCACGATTTGCCACACGTGGAGCGCGTCGTGCCGCCACTGACGTCGATTCGTCAACCTCGAGAGGAACTCGGCCGCATCGCCGCTGAGCTTCTCGTGAAGATGATCGAATCGCCCGACCATCCTCCCGCGGCGCGCAAGCTTGCGCCGACGCTCGTGGTGCGCAAGTCAACCGGCCCGCCGCCGGCCATTCGTTAA
PROTEIN sequence
Length: 360
MPGRGGGAIDRDGGRRARTNVTLEDVARVAGVHYSTVSRALDPAKVWRVNVSTRKHVQAVARRMGYQPDMVASGLKRGRTNTIAVVVGDLGNPRLAPVLRGIANRLEAAGLMSLIGETQDDSGRLKRILNHLLSRRVDGMIMTAARLRDGATLRRIRRQGMPLVLAVQDVPGIRLPACTNDDLLGGVLAAQHLLSLGHRRFAQLRGPTDIYSCVQRAEGFSRTIAAAGAVEVVVRAIATTGSHEEGELMMGSLLDRKGTRPTGIFAHNDLVAFGALTAAEQRGLICPKDLSMVGYHDLPHVERVVPPLTSIRQPREELGRIAAELLVKMIESPDHPPAARKLAPTLVVRKSTGPPPAIR*